| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0970 |
|---|
| Symbol | |
|---|
| ID | 3715933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1129676 |
|---|
| End bp | 1130620 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_346702 |
|---|
| Protein GI | 77457197 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTA CGCCTTACGT GATCGACCAA ACCCAGGCCC GCGAGCTGTT GGCCCGGATC
GATGTGCCGC AGATCCTGCG CAAGCTGTTC CGTGATCTGG CGGCCGGGCA TGCGGTGCAA
CCGGCGCAGC AACTGGTGGA ATTTCCTCAG GGTGCCGGGG ACTTCATCAA CTATCTGGGC
GTGCTGGCGG AAGACGGCGT GTACGGGGTC AAGACTTCGC CTTACATCGT TCGCGAACAA
GGCCCGCTGG TGACGGCGTG GACATTGCTG ATGTCGATGC AGACCGGCCA GCCGTTGCTG
CTCTGCGATG CCCGCGAACT GACCACCGCC CGAACCGCTG CGACCACGGC CGTGGCGGTC
GATGCCCTCG CCCCGTTGAA CGCCACGCGT CTGGCAATCA TCGGCAGCGG CAAGGTCGCC
CAGGCGCACC TGCATTACGT CAAGATGTTG CGCGACTGGC AGAACATCAG CGTGTACTCG
CCTACCTTGA GCGAAGACCC GGCAACCATC CGCCAACTGC AAGCCCTCGA TCCACGTGTG
ACCATTGCCG ACAGCCGTGA AGCCGCCATC GCCGAGGCCG ACGTGATCAT GCTCTGCACC
TCGTCCGCAG GGCCTGTGAT CGACCCGGCA AACTTGAGCA AACCGGCGCT GATCACCTCG
ATCAGCACCA ACGCACCGCG CGCCCATGAA GTGCCACCGC AAAGCCTCAA CGACATGCAG
GTGTTCTGCG ACTATCGTCT GACCACCCCG GGCTCGGCCG GCGAGATGCT GATCGCCAGC
GAGCGACATG ACTGGGACAG CGGCGCGATC CTCGGTGACC TGGCGGATCT GCTCAGCGGA
AAAGTGCAGC GCCCCGATTA CCACCGCCAC GTGTTTTTCC GCTCCATCGG TCTGGGCCTG
GAAGACATCG CCCTGGCCAA CGCCGTCTAT CAATTGCAGC GCTGA
|
|---|
| Protein sequence | MSSTPYVIDQ TQARELLARI DVPQILRKLF RDLAAGHAVQ PAQQLVEFPQ GAGDFINYLG
VLAEDGVYGV KTSPYIVREQ GPLVTAWTLL MSMQTGQPLL LCDARELTTA RTAATTAVAV
DALAPLNATR LAIIGSGKVA QAHLHYVKML RDWQNISVYS PTLSEDPATI RQLQALDPRV
TIADSREAAI AEADVIMLCT SSAGPVIDPA NLSKPALITS ISTNAPRAHE VPPQSLNDMQ
VFCDYRLTTP GSAGEMLIAS ERHDWDSGAI LGDLADLLSG KVQRPDYHRH VFFRSIGLGL
EDIALANAVY QLQR
|
|---|
| |