Gene Pfl01_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0960 
Symbol 
ID3715923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1119619 
End bp1120935 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content60% 
IMG OID 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_346692 
Protein GI77457187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA GCATATTTGG TTTGGGTTAC GTTGGCGCAG TATGTGCCGG TTGCCTGTCT 
GCTCGGGGCC ACGACGTGGT GGGCGTCGAT GTTGCCAAAG ACAAGATCGA CATGATCAAC
GCTGGCAAAT CTCCCATTGT TGAACCGGGC CTGGGTGAGT TGCTCGCACA AGGTATCCAG
ACCGGTCGTC TGCGCGGTAC GACCAACTTC GCCGAAGCGA TTCGCGACAC CGACCTGTCG
ATGATCTGCG TCGGTACGCC GAGCAAGAAG AACGGCGACC TGGAACTGAA CTACATCGAA
GCGGTATGCC GCGAGATCGG TTTTGTCCTG CGTGAAAAGT CCACCCGTCA CACCATCGTC
GTGCGCAGCA CCGTACTGCC GGGCACCGTG GCAAACGTTG TCATCCCGAT TCTCGAAGAC
TGCTCCGGCA AGAAAGCCGG CGTCGATTTC GGCGTGGCGG TCAACCCAGA GTTCCTGCGT
GAATCCACCG CGATCGCCGA CTACGACCTG CCACCGATGA CCGTCATCGG CGAGTTCGAC
AAGGCGTCGG GTGACGTTCT GCAATCGCTG TACGAAGAAC TCGACGCACC GATCATCCGC
AAGGACATCG CCGTCGCCGA GATGATCAAA TACACCTGCA ACGTCTGGCA CGCCACCAAA
GTGACCTTCG CCAACGAGAT CGGCAACATC GCCAAAGCAG TGGGCGTCGA TGGCCGCGAA
GTGATGGACG TGGTCTGCCA GGACAAGACC CTCAACCTGT CCCAGTACTA CATGCGCCCG
GGCTTCGCTT TCGGCGGTTC GTGCCTGCCC AAAGACGTGC GCGCCCTGAC CTACCGTGCC
GGCTCGCTGG ACGTGGAAGC GCCGCTGCTC AACTCGCTGA TGCGCAGCAA CGAATCGCAA
GTACAGAACG CCTTCGACAT CGTTGAAAGC CACGACAAAC GCAAAGTCGC CCTGCTCGGC
CTGAGCTTCA AGGCCGGCAC CGACGACCTG CGCGAAAGTC CGTTGGTGGA ACTGGCCGAG
ATGCTGATCG GCAAGGGTTA CGACCTGAGC ATCTACGACA GCAACGTCCA GTACGCCCGT
GTCCACGGCG CGAACAAGGA CTACATCGAG TCGAAGATCC CGCACGTATC GTCCCTGCTC
AATTCGGACT TCGATTCGGT GATCGACAAC TCCGACGTGA TCATCCTCGG CAACCGCGAC
GAGAAGTTCC GCGCCCTCGC CGAAGAAGCG CCGCAGGGCA AGCAGGTGAT CGACCTGGTG
GGCTTCATGT CCAAGGCCAC CAGTGCCGGT AGCCGCACCG AAGGGATCTG CTGGTAA
 
Protein sequence
MRISIFGLGY VGAVCAGCLS ARGHDVVGVD VAKDKIDMIN AGKSPIVEPG LGELLAQGIQ 
TGRLRGTTNF AEAIRDTDLS MICVGTPSKK NGDLELNYIE AVCREIGFVL REKSTRHTIV
VRSTVLPGTV ANVVIPILED CSGKKAGVDF GVAVNPEFLR ESTAIADYDL PPMTVIGEFD
KASGDVLQSL YEELDAPIIR KDIAVAEMIK YTCNVWHATK VTFANEIGNI AKAVGVDGRE
VMDVVCQDKT LNLSQYYMRP GFAFGGSCLP KDVRALTYRA GSLDVEAPLL NSLMRSNESQ
VQNAFDIVES HDKRKVALLG LSFKAGTDDL RESPLVELAE MLIGKGYDLS IYDSNVQYAR
VHGANKDYIE SKIPHVSSLL NSDFDSVIDN SDVIILGNRD EKFRALAEEA PQGKQVIDLV
GFMSKATSAG SRTEGICW