| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0944 |
|---|
| Symbol | |
|---|
| ID | 3715789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1096409 |
|---|
| End bp | 1097290 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_346676 |
|---|
| Protein GI | 77457171 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGCC TGGATCGATT CGATACCTTC AAAGCCGTGG TCGAGGCCGG CTCGCTGACC
GCAGCCGCTG ACACGCTGGG GCAAACGCGG GCGGTGGTGA GCTTCAACCT CAAACGTCTT
GAGGAAGAGT TGGGCGTCAC CTTGCTCACC CGCAACACCC GGCAACTGGC CCTGACCGAT
GCCGGAGAGC GTTTTTATCG GCGCTGCCTG CGCACGCTGG ACGAAGCACG GCTGGCCGTC
GAGGAAGCGC GCTCGGAACA CTCACAACTC AAAGGCACCC TGCGCATCAC CACGACCGTG
GAGTTCGCGC TGGCGCAGGT GGTGCCGGCG CTGGAAGTGT TTCGACAACA GCAGCCGCAA
CTGAATATTC ACTTATCCAC ATCCTCGACC CACGCCGATC TGATCTCCGA ACGGTTCGAC
CTGGCGATCC GTTTGGGACG CATGCTCGAC TCCAATCTGC GCGCGGTGCA GTTGTCGACA
TTCGAGGTGT TTGCCGTGGC GGCGCCGGGA CTGATCGAGC GTTTTGCGCC GGTCGATACG
CTGGCGGTGC TGGAGTCGAT GCCGACGCTG GGGCATGGTC GAGTGCCGGA AATGACGGTC
AGCGACCCGG CCGGCACCGA GCATATCTAC CAGCCAAAAC CGGGAACCAC CGCCATCGTC
GCCGACAACT CGGCGACCCT GCGCGCCTTT GCGCTGACCG GGCAAGGCGT CGCGATTCTG
CCGCAGTGGC TGATTCAGGA AGACCTGGAT GCCGGGCGAT TGCAGCGCTT GCTGCCGGAT
TACCGCTTCG CCCAGCAAGG GGTTTATGCG CTTTACCCGG ACACCCGGCA CCTGCCACTG
AAGGTGCGGG CGTTCATTGA TTTCATGAAG GGCCGGCGCT GA
|
|---|
| Protein sequence | MVSLDRFDTF KAVVEAGSLT AAADTLGQTR AVVSFNLKRL EEELGVTLLT RNTRQLALTD
AGERFYRRCL RTLDEARLAV EEARSEHSQL KGTLRITTTV EFALAQVVPA LEVFRQQQPQ
LNIHLSTSST HADLISERFD LAIRLGRMLD SNLRAVQLST FEVFAVAAPG LIERFAPVDT
LAVLESMPTL GHGRVPEMTV SDPAGTEHIY QPKPGTTAIV ADNSATLRAF ALTGQGVAIL
PQWLIQEDLD AGRLQRLLPD YRFAQQGVYA LYPDTRHLPL KVRAFIDFMK GRR
|
|---|
| |