| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0892 |
|---|
| Symbol | |
|---|
| ID | 3715683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1037495 |
|---|
| End bp | 1038205 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_346624 |
|---|
| Protein GI | 77457119 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCTC CCACCGCTCC CATCCTTATC ACCGGCGCCG GCCAGCGGGT CGGCCTGCAT
TGTGCGCAGC GTCTGCTGGA AGATGGTCAT CGGGTGATCT TCACTTACCG CAGCGAACGG
CCGGGTGTGA AGACCTTGCG GGATCTGGGC GCCCTAGGGC TGCACGCGGA CTTTTCCAGC
GAAGCTTCGA TCCTCGCCTT CATCACCGAG CTGAAGTCAC ACACCGACAG CCTGCGCGCG
ATCGTGCACA ACGCCTCGGA GTGGCTGGCG GAAACCGCTG ACGGCGAAGC CGAAGCCTTC
AGCCGCATGT TCAACATTCA CATGCTGGCG CCGTACCTGA TCAATCTGCA TTGCGCTGAA
TTGCTGCAAC GTTCGAGTCC TGCCGACATC ATCCACATCA GCGATGACGT CACCCGCAAG
GGCAGCAGCA AACACATCGG CTATTGCGCC AGCAAGGCCG GGCTCGACAG TCTCACGCTG
TCCTTCGCCG CGCGCTACGC GCCGTCAATC AAGGTCAACG GCATCGCACC GGCCCTGCTA
TTGTTCAATC CCGACGACGA CGCGGAGTAC CGTGCCAAGG CGCTGGCCAA GTCCGCGCTG
GGCATCGAAC CCGGCAGCGA AGTGATTTAT CAGAGCCTGC GTTATCTGCT CGACAACCCG
TATGTCACCG GCACCACCCT GACCGTCAAC GGCGGGCGGC ACGTCAAGTA A
|
|---|
| Protein sequence | MTSPTAPILI TGAGQRVGLH CAQRLLEDGH RVIFTYRSER PGVKTLRDLG ALGLHADFSS
EASILAFITE LKSHTDSLRA IVHNASEWLA ETADGEAEAF SRMFNIHMLA PYLINLHCAE
LLQRSSPADI IHISDDVTRK GSSKHIGYCA SKAGLDSLTL SFAARYAPSI KVNGIAPALL
LFNPDDDAEY RAKALAKSAL GIEPGSEVIY QSLRYLLDNP YVTGTTLTVN GGRHVK
|
|---|
| |