Gene Pfl01_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0872 
Symbol 
ID3715605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1017665 
End bp1018717 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content61% 
IMG OID 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_346604 
Protein GI77457099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.942515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.720307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT TCTGGAGCCC GTTCGTCAAG GATCTGGTGC CTTACGTGCC GGGCGAGCAG 
CCGAAGTTGA CCCGTCTGGT CAAACTCAAT ACCAACGAAA ACCCGTACGG CCCGTCGCCA
AAAGCCTTGG CGGCGATGCA GGCCGAACTC AACGACAACC TGCGTCTGTA TCCGGATCCG
AACAGCGATC TGTTGAAAAA TGCCGTCGCC AAGTACTACG GCGTACAGAA CAATCAGGTG
TTCCTCGGCA ACGGCTCGGA TGAAGTGCTG GCGCACATCT TCCACGGTCT GCTGCAACAC
GATCAGCCGA TCCTGTTCCC GGACATCAGC TACAGCTTCT ATCCGGTCTA CTGCGGCCTT
TACGGCATCA CGTTCGACGC GGTGCCGCTG GATGCCCAGT TCCGGATCAA CCCGGCTGAC
TACGCCAAGC CGAACGGCGG GATCATTTTC CCCAACCCGA ACGCACCGAC CGGTTGCCTG
CTGGCGCTGG AAGCGGTCGA GCAGATTCTC AAGGGCAGCC CGGATTCGGT GGTGGTGGTC
GACGAGGCCT ACATCGACTT CGGCGGCGAA ACCGCGATCA GCCTGGTGGA CCGTTATCCG
AACCTGCTGG TGACTCAGAC CCTGTCCAAG TCCCGTTCGC TGGCGGGCCT GCGGGTCGGT
CTGGCGGTCG GCCATCCGGA CCTGATCGAG GCGCTGGAGC GGATCAAGAA CAGCTTCAAC
TCCTACCCGA TCGATCGCAT GGCGAATGTC GGTGCTGCAG CGGCATTCGA GGATCGCGAA
TACTTCGACA AGACCTGCGC ACTGGTGATC GAGAGTCGCG AATGGGTGGT TGCGCAGTTG
CAGGCCAAGG GCTTTGAAGT GCTGCCGTCA GCGGCGAACT TCATCTTCGC CCGGCATCCG
CAACACGATG CGGCGGGGCT GGCAGCCAAA CTGCGTGAAC AGGGCGTGAT AGTGCGCCAC
TTCAAGCAGG AGCGGATTGC CCAGTTCCTG CGGATCTCGA TCGGCACGCC GGAGCAGAAT
CAGGCGTTGA TCGACGGTCT GGGCGAACTC TGA
 
Protein sequence
MSKFWSPFVK DLVPYVPGEQ PKLTRLVKLN TNENPYGPSP KALAAMQAEL NDNLRLYPDP 
NSDLLKNAVA KYYGVQNNQV FLGNGSDEVL AHIFHGLLQH DQPILFPDIS YSFYPVYCGL
YGITFDAVPL DAQFRINPAD YAKPNGGIIF PNPNAPTGCL LALEAVEQIL KGSPDSVVVV
DEAYIDFGGE TAISLVDRYP NLLVTQTLSK SRSLAGLRVG LAVGHPDLIE ALERIKNSFN
SYPIDRMANV GAAAAFEDRE YFDKTCALVI ESREWVVAQL QAKGFEVLPS AANFIFARHP
QHDAAGLAAK LREQGVIVRH FKQERIAQFL RISIGTPEQN QALIDGLGEL