Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0743 |
Symbol | |
ID | 3715047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 870929 |
End bp | 872656 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_346475 |
Protein GI | 77456970 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00289763 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.898724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTG CAGAATCAGT TAACGTAGGT TTCGACGCGA TCCGCGTTTG TGAGGCGATC GCAAAAATAG GCTATGAGCC ATACACCGCT ATAATGGATA TTATAGACAA CTCAGTTACC GCAGAGGCGT CAACTATTTC CATTTCGGTA GAATTGAGAC CAGGAAAAAC GCTAAAGAAT AGGAATAGTG TATCAAGCTA TAAAATAATG GACGACGGCA AAGGCATGTC TCACGACGAG ATAGTCAATG CCTTCACCTT AGGTTCGAAA AGAAACTACG GTAAAAACAG CCTTTCGAAG TATGGCATGG GCCTTAAGTC GGCAGGCCTT TCTCTCGGAA GCAAAATAAC GATCACAAGT AAAAAAGACG GAGTAATTTC CGACAAGTAC ACTTTCGACC TCGAGGAGAT TGAGAAGGAG AACAAGCTTG CTTTGATAAG ACAGCCGCTC ACGGAAGCTG AAAAGTTAGA TTTCTCAAGC GATGTAAACG GCTCAACTGG AACCATTGTA GAGATTGCGG GATGTGAAAA TGTTAATCAA TCCTCGCCTG GAACCACTTT ATCAAAGTTG AGGGAACGCC TTGGCGTTGT CTACTATACT TTTCTCAAAG ACGAAGAAAA CCCACTAAGC ATTAGAATCC GAACTGCGCT AAGTGATAAA AAAGGGGAAT ATGAGGAAAT AAAAGCAAAA GATCTGCTAT TTACTGAAAT GGCAAGTAAA AATACCGGTT GGTCGCTTGA TAGCTACGAC TTCTTTAGTC CATACCTAAT TCTAGATGAA GACTGGGATT CGCTGCGGGA TAAAGATAAT AATCCATTAC CGGCTATAAA AATTCAAGCC GTGGCGTTCC CTCAAGCGAG GATGGCAGAT GAAAAATCCC CACTACCTAT TGACAAAAAA CTAATTGTAA AAAGCTATGG AGTATCACGC GAGAATAGTG GATTTTTCAT ATACAGAAAT GGACGCCTTA TACGATGGGG AGATGGATTA GAGCGCGCAA CGGGCAAGCC GCTGATAACC AAAGACGATA TCAACATTCG GATCAGATTC GAAATTCAAG ATGTGCACGA CGACGTTTTA CATGTCGACG TTTCAAAGCA GCGCCTAGAA ATTGATGACG AACAAATATA TAACCTTGAG ACCATTATAT CCAAAGCAAT TCGGATAGCC AAAGAGATCC GCACAGCTTG TCATGAAAAA ATTAATCTTA AAAAAGGCGA GGGAGAAACG TTTAGCCAGT CGGTGAGAGA TGTACCAGAG GATGACCCTC AACAGATGGG CAAAGGGGAA GTAGAGCCCG AAACACTTTC ACGACAAGAA AAGAAAAACG AGGAAGCTCA GTTAGCTCTT GATAAAATAG CAGCTGAGAA AAAAGAAAAT GGCGACATTC TTGACTTAGA AGCTGACTTT CAAAAAATCA GATACTCAAA TAAGATACCC TTTGGACAAG TATGGAAACC TTACTTTGAT TCAAAGGAAG GAGTTTTTGT TTGCATAAAC AAAAACCACC CTTTTTATGA CGTATATTTG AATCGATTTG AAGACGGGTC AAAAGAAAGA CTAACAGCAG AAGCCTTAAT CTTCGCTTCA GCATTAGCTG AAAGTAATGT TTTTTCTTAT GAGACCACCG TTACGCAAAG CGATCTAGAA CGGATATTTC GTCGTTTCCA TAGCAACATA CATCAATTTC TGCAGGATTG GACATGGGAA AACACCTCGG AGGATTAA
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Protein sequence | MSSAESVNVG FDAIRVCEAI AKIGYEPYTA IMDIIDNSVT AEASTISISV ELRPGKTLKN RNSVSSYKIM DDGKGMSHDE IVNAFTLGSK RNYGKNSLSK YGMGLKSAGL SLGSKITITS KKDGVISDKY TFDLEEIEKE NKLALIRQPL TEAEKLDFSS DVNGSTGTIV EIAGCENVNQ SSPGTTLSKL RERLGVVYYT FLKDEENPLS IRIRTALSDK KGEYEEIKAK DLLFTEMASK NTGWSLDSYD FFSPYLILDE DWDSLRDKDN NPLPAIKIQA VAFPQARMAD EKSPLPIDKK LIVKSYGVSR ENSGFFIYRN GRLIRWGDGL ERATGKPLIT KDDINIRIRF EIQDVHDDVL HVDVSKQRLE IDDEQIYNLE TIISKAIRIA KEIRTACHEK INLKKGEGET FSQSVRDVPE DDPQQMGKGE VEPETLSRQE KKNEEAQLAL DKIAAEKKEN GDILDLEADF QKIRYSNKIP FGQVWKPYFD SKEGVFVCIN KNHPFYDVYL NRFEDGSKER LTAEALIFAS ALAESNVFSY ETTVTQSDLE RIFRRFHSNI HQFLQDWTWE NTSED
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