Gene Pfl01_0685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0685 
Symbol 
ID3714302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp799475 
End bp800824 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content62% 
IMG OID 
Productbeta alanine--pyruvate transaminase 
Protein accessionYP_346418 
Protein GI77456913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000140435 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC CTGAAAACGC GCCGTCGCCA CTGGCCAGCC AACTGAAGCT GGACGCGCAC 
TGGATGCCGT ACACCGCCAA CCGCAACTTC CAGCGCGACC CGCGTCTGAT CGTCGGTGCC
GAAGGCAGCT GGCTGATCGA CGACAAGGGC CGCAAGGTGT ACGACTCGCT GTCCGGTCTG
TGGACCTGCG GCGCCGGGCA TACCCGCAAG GAAATCCAGG AAGCGGTGGC CAAACAGTTG
GGCACCCTCG ATTACTCGCC GGGCTTCCAG TACGGCCACC CGCTGTCGTT CCAGCTGGCG
GAGAAAATCA CCGACCTGAC GCCGGGCAAC CTGAATCACG TGTTCTTCAC CGACTCCGGT
TCCGAGTGCG CCGATACCGC GGTGAAAATG GTCCGTGCTT ACTGGCGCCT GAAAGGCCAG
TCGACCAAGA CCAAGATGAT CGGCCGCGCC CGTGGCTATC ACGGTGTGAA CATCGCCGGC
ACCAGCCTTG GCGGCGTCAA CGGCAACCGC AAGCTGTTCG GTCAGGCGAT GATGGATGTC
GATCACCTGC CGCACACTTT GCTGGCGAGC AATGCTTTCT CCCGTGGCAT GCCGGAGCAG
GGTGGTATCG CCCTGGCCGA TGAGCTGCTG AAGCTGATCG AACTGCACGA TGCGTCGAAC
ATCGCAGCGG TGTTCGTTGA GCCTATGGCG GGTTCCGCTG GCGTGCTGGT TCCACCACAG
GGCTACCTCA AGCGTCTGCG TGAAATCTGC GATCAACACA ACATCCTGCT GGTGTTCGAC
GAAGTGATCA CCGGCTTCGG CCGTACCGGC ACCATGTTCG GCGCCACCAC CTTCGGCGTG
ACCCCGGACC TGATGTGCAT CGCCAAGCAA GTCACCAACG GCGCGATCCC TATGGGCGCG
GTGATTGCCA GCTCCGAGAT CTACCAGACC TTCATGAACC AGCCGACCCC GGAATACGCC
GTTGAATTCC CGCACGGCTA CACCTACTCG GCACACCCGG TGGCTTGCGC CGCGGGCCTG
GCGGCACTCG ACCTGCTGCA AAAGGAAAAC CTGGTGCAGA GCGTGGCCGA AGTCGCACCG
CATTTCGAAA ATGCCCTGCA TGGTCTGAAA GGCGCGAAGA ACGTCATCGA CATTCGTAAC
TTCGGCCTGG CCGGTGCGAT CCAGATTGCG GGCCGTGACG GCGACGCCAT CGTGCGTCCG
TTCGAAGCCG GTATGGCGTT GTGGAAAGCC GGGTTCTACG TGCGCTTCGG TGGCGACACC
CTGCAGTTCG GCCCAACCTT CAACAGCAAG CCGCAGGACC TTGATCGTCT GTTCGACGCG
GTCGGCGAAG TGCTGAACAA GCTCGACTGA
 
Protein sequence
MNMPENAPSP LASQLKLDAH WMPYTANRNF QRDPRLIVGA EGSWLIDDKG RKVYDSLSGL 
WTCGAGHTRK EIQEAVAKQL GTLDYSPGFQ YGHPLSFQLA EKITDLTPGN LNHVFFTDSG
SECADTAVKM VRAYWRLKGQ STKTKMIGRA RGYHGVNIAG TSLGGVNGNR KLFGQAMMDV
DHLPHTLLAS NAFSRGMPEQ GGIALADELL KLIELHDASN IAAVFVEPMA GSAGVLVPPQ
GYLKRLREIC DQHNILLVFD EVITGFGRTG TMFGATTFGV TPDLMCIAKQ VTNGAIPMGA
VIASSEIYQT FMNQPTPEYA VEFPHGYTYS AHPVACAAGL AALDLLQKEN LVQSVAEVAP
HFENALHGLK GAKNVIDIRN FGLAGAIQIA GRDGDAIVRP FEAGMALWKA GFYVRFGGDT
LQFGPTFNSK PQDLDRLFDA VGEVLNKLD