Gene Pfl01_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0639 
Symbol 
ID3713555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp751180 
End bp751650 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content62% 
IMG OID 
Productpeptidase A24A, prepilin type IV 
Protein accessionYP_346372 
Protein GI77456867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCT TTGTCCTACT GATCTGGCTG ACACTCTGCG CCGCGCAGGA TGCCCGCGAA 
CGCCACATCG GCAACGGCCT GACCCTCGGC GTCGGCGCGC TGGCGCTGGT CTGGTTGCTG
GTCACCGGCA GCACCTGGCT CGGGGCGGAT GCGGCGCAGG GCGGCTGGGC GGTGTTGCTG
GCGCTGGCGC TCACGCTGCC GGGTTACCTG CTGGGGCGAA TGGGCGGCGG CGATGTGAAA
CTAATGACAG CCCTGGCCCT CGCGACAGAC GGTCAGCACC TGCTCGGCGC GTTTATCGGC
GCTGCTCTCT GCAGTGCGAT GTGGGTGCTG CTGGTGCCAA AAGTCTGGCT GCATGCCAGT
CAAGGGGTTA GAGAACGTCT TCGATATTTC AGTCCTGAAA TGTCAAAAAA GCTGCCATTT
GCGCCGTTTG TGCTGGTTGG AACAATCCTG ACTTTTTATT GGATCCATTA G
 
Protein sequence
MHSFVLLIWL TLCAAQDARE RHIGNGLTLG VGALALVWLL VTGSTWLGAD AAQGGWAVLL 
ALALTLPGYL LGRMGGGDVK LMTALALATD GQHLLGAFIG AALCSAMWVL LVPKVWLHAS
QGVRERLRYF SPEMSKKLPF APFVLVGTIL TFYWIH