Gene Pfl01_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0573 
Symbol 
ID3712256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp665729 
End bp666523 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_346306 
Protein GI77456801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.361207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTA AACACATCGA TCTGCTGGAT TTCAGCGAAC TGCCGTCGGC GGTGTATTTC 
CGCTATGCCG ACTTCAACGC CCATGAATAC GCCGCGCCGC ACCGCCATCC GTGGGGCACG
CTGGAGTACG CGGCCCACGG CGTGCTGCAC ATGGATGTCG ACGGCAGCCG CTTCATGTCG
CCGCCGCAAT ACGCGGTGTG GGTGCCGCCG CAGGTCGAGC ACAGTTTCTA CAGTCATCAG
CCGGTCAATT ATCGGGCGGT GTGCCTGGCG CCGGATGTGT GTTCCGATTT GCCGGCGCAG
GCCTGCACCC TGGCGATCAG CGACATTCTC AAGGCGATCC TCAAGGACTT CGCCGCCCGC
GATGTGAAGA TCCCGGCGTT CGAAGCCGAC CAGCGCCTGG CCCAGGTGCT GGTGGATCAA
TTGCGCCAGG CCCCGGTTCA TCAATGCTAT TTGCCTTACG CCAGCAGCCC CGGTTTGCTG
ACCATTCTCG AAACCCTACA GGCCGAACCT GGCAATAATG AACCGCTGGC GCATTGGGCG
GCGCAGGTGC ATGTCAGCGA GCGCACGCTG GCCCGGCAGT TCGTGCGGGA GCTGGGGATG
AGTTTCGGCG AGTGGCGTCA GCGCCTGCGG TATCTCGTGG CCATCGAGGC GCTGGAAAGT
TCGCGCAGTG TGCAGGAAAT CGCCTTCGAT CTCGGCTACA GCAGCGGTTC GGCCTTCATC
GCCATGTTTG CCCGGCAGGC CGGATGTACC CCGGAGCAGT ATCGGCGCAG CCATCTTGAG
GCTAGGAAGG TGTAA
 
Protein sequence
MNSKHIDLLD FSELPSAVYF RYADFNAHEY AAPHRHPWGT LEYAAHGVLH MDVDGSRFMS 
PPQYAVWVPP QVEHSFYSHQ PVNYRAVCLA PDVCSDLPAQ ACTLAISDIL KAILKDFAAR
DVKIPAFEAD QRLAQVLVDQ LRQAPVHQCY LPYASSPGLL TILETLQAEP GNNEPLAHWA
AQVHVSERTL ARQFVRELGM SFGEWRQRLR YLVAIEALES SRSVQEIAFD LGYSSGSAFI
AMFARQAGCT PEQYRRSHLE ARKV