| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0549 |
|---|
| Symbol | |
|---|
| ID | 3712944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 641371 |
|---|
| End bp | 642276 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_346282 |
|---|
| Protein GI | 77456777 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0725196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.266185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACA AACGCCACTT GCCGTCGATC ACCGCGTTGC AGTGCTTCGA GGCCGTGACC
CGGCACCTGA GTTTCACCCG GGCTGCCGAG GAACTGAACC TGACCCAGAG CGCTGTCAGC
AAGCAGGTGG CGCAGCTCGA AGAATTGCTG CAGCACTTGT TGTTCCGTCG GGTTCGCCGT
CGTTTGCAGA TGACCCCGGC CGGCGATCTC TACTTGGTGG AAGTCAGAAA AATCCTGACC
CAGGTCGAGA TGTCGACCCA TTACCTGCGT TCCTACGGCG GCGAAACCGA AGTCCTGCGC
GTCTCCACGC CCTCGACCTT CGGCGCCCGC TGGCTGGTGC CGCGCCTCAA GGGCTGGCGT
CTGCGTCATC CATCGATTCA TCTGGACCTG TGCAACGAGC AGGAGGCCGA TGACTTGCTG
CAAGGGCGCA GCGACCTGGC GTTCTATTTC GGCCAGGGTT CTCGCCCCGG CACCGAATGC
CTGAAGCTGT TCGGCGAAGA ATTGGTGCCA GTCTGCGCGC CGGGCAGCCT GCCGGACACT
CCGTTGACTG ATCCAACGCA ACTCACCGAT CTGGTCCTGC TGCAGAATGC TTCGCGCCCG
CAAGCGTGGC ACGACTGGTT CGACAGCCAG GGTTACCAGA CCGAACACAG CTACCACGGC
CCGCGCTTCG AAACCTTTTA TATGTGCATC CGCGCCGCCC AGGTCGGCTG TGGCGTCGCC
CTGCTGCCGA GGTTTCTGGT GGAAGAGGAA TTGGCCGACG GCAAACTGGT CATTCCCTGG
CAGCATGCAA TGCCCAGCAC CGATGCGTAT TACCTGGCTT ATCCGGAACA CGCGGCGGAA
GTGCCCAAGG TGCGGGATTT CGTGAAGTGG ATGCTGGAGC AGATCGACAG TCCTGATGCG
GTCTGA
|
|---|
| Protein sequence | MLNKRHLPSI TALQCFEAVT RHLSFTRAAE ELNLTQSAVS KQVAQLEELL QHLLFRRVRR
RLQMTPAGDL YLVEVRKILT QVEMSTHYLR SYGGETEVLR VSTPSTFGAR WLVPRLKGWR
LRHPSIHLDL CNEQEADDLL QGRSDLAFYF GQGSRPGTEC LKLFGEELVP VCAPGSLPDT
PLTDPTQLTD LVLLQNASRP QAWHDWFDSQ GYQTEHSYHG PRFETFYMCI RAAQVGCGVA
LLPRFLVEEE LADGKLVIPW QHAMPSTDAY YLAYPEHAAE VPKVRDFVKW MLEQIDSPDA
V
|
|---|
| |