Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0470 |
Symbol | |
ID | 3713227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 544195 |
End bp | 544947 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | lipopolysaccharide kinase |
Protein accession | YP_346203 |
Protein GI | 77456698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.375351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATT TTCTGTCCGC TGAAGACCGT GCGCTGCTGG AGCGCCACGG TCTCGGCACG TTCGATGCGC TGTGGTCCAA GCAGCTCGAC GCCGTGGATG AGCCCAACAC TGATGGCGGC GGCTGGAGCA GCGTGTTTCG TCTGGACCTG GAAGGGCATG GCTATTACCT CAAGCGCCAG TGCAATTACC TGACCCGCAC GTTGCACGCA CCCTTCGGCG AGCCGACGTT CGCCCGGGAA TTTCGCAACA TCAGTCGTTA CAACAAACTC GGCATTCCGG CGTTGCAGGC GGCGTTCTTC GGTGAGCGCA AAGTCAATGG TGAAGTCCGT GCGATCCTGC TGACCCGCGC GCTGGACGGC TGGGACGATC TCGATTCGTT GCTGCAGCGC TGGTCGGACC TCGATGCCGC GCAGCAGTCG GCGATTCTCA AGTCTTGCGG ACTGTTGGCG CGCCATCTCC ACGGCATGCG CCAGGTGCAC GGCTGCTTTT ATCCCAAGCA CATTTTCCTG CGTGCCGAGG GCGACGGCTA TCAGGCGCAG TTGATCGATC TGGAAAAGAC TCGGCCGTTG CTGTTCGGTA TGCGTGATCG GGTCAAGGAT CTGGAGCCGC TGCTGCGCCG TGCGCCGGAG TGGAGCGAAG CGCAATTGCG TGAGCTGCTG GCGGCGTATC TCGATCAATC GACGGACAGT TCGCTGGTCG ACAGCTGGGT CACGCGGCTG ACCGCGCGGC GCAGTCGCAA GGAGACCCGC TGA
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Protein sequence | MTDFLSAEDR ALLERHGLGT FDALWSKQLD AVDEPNTDGG GWSSVFRLDL EGHGYYLKRQ CNYLTRTLHA PFGEPTFARE FRNISRYNKL GIPALQAAFF GERKVNGEVR AILLTRALDG WDDLDSLLQR WSDLDAAQQS AILKSCGLLA RHLHGMRQVH GCFYPKHIFL RAEGDGYQAQ LIDLEKTRPL LFGMRDRVKD LEPLLRRAPE WSEAQLRELL AAYLDQSTDS SLVDSWVTRL TARRSRKETR
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