Gene Pfl01_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0430 
Symbol 
ID3712438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp488698 
End bp491031 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346163 
Protein GI77456658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.152141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.223141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGAGTG AACGCAGGCT GCCCTGGCTG TTCCTGATCC TGCTGCTGGC GGTCGTCGCA 
CTGGGCGCCT GGCAGTGGCG CGACGGAGCG CCGTTGTCGG CCAACCTGAT GGAGCTGGTG
CCCGGCACCC ACCCGGACGC CCTCGAACTG CGCGCCGAAC AACGCATGCA GGAACCGCTC
AACCGCGACA TGCTGGTGCT GGTCGGCCAC ACTGATCGCC AGCAAGCTGT CGCGATGGCC
CAGACCCTGG GCGAGCAATG GCAGGCCAGC GGGTTGTTCG AAAAGGTCCA GTGGAACCTG
CAGGCCGATC TGCCGGCCCT GCGCACGCAA TTGCTGCAAG GGCGGCTGGC GATGCTCTCG
GCGGATGACC GACAACTGCT GATCGAACAT CCCGACGCCT TTATCCAGCA ACGCGTACAG
GCGCTGTTCG ACCCGTTCAC CGGGTTCAGT CTGGTGCCGA GCCAGGACGA CTGGCTGGGC
CTGACCGGGC GCATCCAGAA CAGCCAGCCG CAACATGGCG CGGTGCAACT GGACATCGGC
AGCGGCGCGT TGATCGCCGA CGCCGACGGC AAGAGCTGGG TGCTGCTGCG CGCACGCACC
ACCGGCAGCG CCTTCGACAT GAATCAACCG CTGCAAGTCG CCGCGCTGCT GCAACACAGC
CGCGAGCAAG CAGCGAGTGC CGACGTGCAA CTGCTGGCCG CCAGCGGTCT GCTGTACGCC
GCCAACGGTC AGCAGCAGGC GACCCGGGAA ATGACCTGGG TCGGCGGCGG CGCCACCATC
GGCATCCTCT TGCTGTTGCT GCTCGCCTTC CGCCGCTGGC GGGTGCTGCT GGCGTTCATT
CCGGTGCTGG TGGGCATGCT GTTCGGCGCA GTGGCCTGTG TGGCGCTGTT CGGGCACATG
CACGTGATGA CGCTGGTGCT CGGTTCCAGC CTGATCGGGG TGGCGGTGGA TTACCCGCTG
CACTATCTGT CCAAGAGCTG GAGCCTCAAG CCGTGGCACA GCTGGCCGGC GTTGCGCCTG
ACCCTGTCCG GGCTGACGTT GAGCCTGATC ACCAGCGCCA TCGGTTACCT GGCGCTGGCC
TGGACGCCTT TCCCGGCACT GACCCAGATC GCCGTGTTCT CCGCCGCCGG TTTGCTCGGC
GCCTACCTGT CGGCGGTGTG CCTGTTGCCG GCGCTGCTGA AAAACGTCGA ACTGCGCCCG
GCGCAATGGC CGCTGCAACT GGCCGAGCGT CTGGTGCGAC TGCGGGAAAC CCTGCTCGAA
CACGTCAGAA CGCCGGTGTT GCTGGCCCTG CTGATCGCCT TCTGCGTCGG CGGCCTGCTG
CAACTGGAGA GCAAGAACGA CATTCGCCAG TGGGTCGGCG CGCCGCAACG CCTGACCGAT
GAGGCGCAGA CCATCGCGCG GATGACCGGC TATCAGCCGA CCAGCCAGTT CTTCCTGGTG
CGCGCCGCCG ATCAGCAGCA ATTGCTGGAA CGGCAAGCGG CCCTGAGCGA GCGCCTGGAT
CAATTGGTCA ACCTCGACAA GTTGCAGGGA TATCTGGCGC TCAATCAATT GGTCAGCCCG
CCGGCTCAGC AGCAACAAGT GCGTGAGGCG CTGAGCAAGT TGCCGCAGTT CTGGCAGCCG
TTGCTGGAGG TCGGCGTGCC GCTGGCGGCG CTGCAAACCG AACTGCAACA GTTGCAGGCG
CTGCCCGCCG AAGATATCGA TGCCGCGCTG GCCGGCCCGC TCGGCGAGCC CTACCGCACG
CTGTGGCTCG GGCCGACCGA GGACGGCGTG GCAGCGATGG TCAGCCTGCA AGGCCTGAAC
AATCCGTCGC TGTTGCGGGT GCAGGCGCTG GACCTGCCGG GCGTGATGCT GGTGGATCGG
CTCGGGGATC TGAACAAGGT ATTCGCCCAG ACCCAGATCA GCGCCGCTGA GCTGAAACTC
GCGTCCTGCG TGTTGATCGT GCTGGTGCTG ATGCTGCCGT TCGGTCTTGG TGGCGCGCTG
CGGATCGTCG CCCTGCCGTT GCTCGCTGCG CTGTGCAGCC TGGCCAGCCT GGGCTGGCTC
GGTCAGCCGC TGACCCTGTT CAGCCTGTTC GGCCTGCTGC TGGTGACGGC GATCAGCGTC
GACTACGCGA TCCTCATGCG CGAGCAGGTC GGCGGCGCGG CCGTCAGCCT GCTCGGCACC
TTGCTCGCGG CCGCAACCAC CTGGCTGTCG TTCGGTCTGC TGGCGGTGTC GAGCACCCCG
GCGGTGAGTA ACTTCGGGCT GTCGGTGAGC CTCGGCCTGG CGTTCAGCTT CATGCTCGCG
CCGTGGGCCG GACGTCAGCC CCACGCGGTT GCCGTCACGG AGCCTGCAGC ATGA
 
Protein sequence
MPSERRLPWL FLILLLAVVA LGAWQWRDGA PLSANLMELV PGTHPDALEL RAEQRMQEPL 
NRDMLVLVGH TDRQQAVAMA QTLGEQWQAS GLFEKVQWNL QADLPALRTQ LLQGRLAMLS
ADDRQLLIEH PDAFIQQRVQ ALFDPFTGFS LVPSQDDWLG LTGRIQNSQP QHGAVQLDIG
SGALIADADG KSWVLLRART TGSAFDMNQP LQVAALLQHS REQAASADVQ LLAASGLLYA
ANGQQQATRE MTWVGGGATI GILLLLLLAF RRWRVLLAFI PVLVGMLFGA VACVALFGHM
HVMTLVLGSS LIGVAVDYPL HYLSKSWSLK PWHSWPALRL TLSGLTLSLI TSAIGYLALA
WTPFPALTQI AVFSAAGLLG AYLSAVCLLP ALLKNVELRP AQWPLQLAER LVRLRETLLE
HVRTPVLLAL LIAFCVGGLL QLESKNDIRQ WVGAPQRLTD EAQTIARMTG YQPTSQFFLV
RAADQQQLLE RQAALSERLD QLVNLDKLQG YLALNQLVSP PAQQQQVREA LSKLPQFWQP
LLEVGVPLAA LQTELQQLQA LPAEDIDAAL AGPLGEPYRT LWLGPTEDGV AAMVSLQGLN
NPSLLRVQAL DLPGVMLVDR LGDLNKVFAQ TQISAAELKL ASCVLIVLVL MLPFGLGGAL
RIVALPLLAA LCSLASLGWL GQPLTLFSLF GLLLVTAISV DYAILMREQV GGAAVSLLGT
LLAAATTWLS FGLLAVSSTP AVSNFGLSVS LGLAFSFMLA PWAGRQPHAV AVTEPAA