| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0412 |
|---|
| Symbol | |
|---|
| ID | 3712459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 468333 |
|---|
| End bp | 469934 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_346145 |
|---|
| Protein GI | 77456640 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0974914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.234903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGTT TGCATGCCGA CGAGGCGTTC CTCGGCCATT TCCAGTTAAG TCACGACCCT
TTCGCGCCGC GGGTGCCGGG CTTCAAATTC TTCCCGGCCC AGCGCAAGCC GGTGCTGGGT
CAGCTGCATC ATCTGGCGCG TTACAGCCAG TTGCTGCTGG TGGTCACCGG CCCGCAGGGT
AGCGGCAAGA CCCTGCTGCG TCAGGCGCTG GTGGCCAGCA CCAACAAGCA ATCGGTGCAG
AGCGTCGTCG TTTCCGCCCG TGGCGCAGGC GATGCAGCCG GTGTGCTGCG TCAGATTGCC
CAGGCACTGG ATGTGGCCCA GGCCGAAGTC GGGGCGATCC TCGATCAGGT CGTGCAGCTC
GCGCTGACCG GTCAGGAAGT CTATCTGCTG GTGGACGATG CCGAGCAGCT CGACGAGTCC
GCGCTTGAAG CACTGATGGC GCTGGGCGCC GGCGCGCCGG AAGGTCGCCC GCATGTGTTC
CTGTTCGGCG AGTCGTCACT GATCGCGCAG CTCGAGGCTT TGCACCTTGA GGAAGAGCGC
TTTCACGTCA TTGAACTGCA GCCGTACACC GAAGAAGAAA CCCGCGAGTA TCTTGACCAG
CGGCTCGAAG GCGCCGGCCG CGGTGTCGAA CTTTTCACCG CGGATCAGAT CTCTGATATT
CACGAAAGCT CCGAGGGTTG GCCGGGCAAC ATCAACCAGG TTGCTCGCGA TGCTCTGATC
GAAGTCATGA TTGCCAGCCG CTCTGCGGTC AAGCGTCCAA GTATGGGGTT CAACATGCCG
AAGAAACACG TATTGGCGAT TTCCGCCGTC GTTGTGGTCG CGGTTGCTGC CGCCTGGCTG
ATGCCGGGTC GCAACAAGGC ACCGACCACC GGTGCGCCGG CCAACGAGCA GGCGCAACTG
CCCTTGGGCC AGGGTGCGCC GCAAGCGGGT GGCGCACCGT CCGTCGAATT CAACGGCAAT
ACCCAGCCGA TGCCGCTGCC ATTGGTCGGC AACTCGCAGC CGGTAATGCG CGGTCCGCTG
GCTGAAGCCG CTGGGGGCAT CACTGAAGGC GACGACGGCG TGCCGGTCGA AGGTTCCAGC
AACACGCCAC CGACCGTGAC CACCACCGCG CCACCTGCGG GCGTTCAGGC CGGCCCTGCG
CCGACACCGG TTCCGGTTCC AGTCCCGGCG GCCAAGCCGA CCCCGGCGCC GACCCAGGTC
GCGACCGCCA AGCCTGCTCC GGCCGCTCCA GTGGCCAAAC CAGCTCCGGC ACCTGCCAAG
CCTGTTGCCG CCGCCAAACC GGCCGAGAAG CCGGTCACCG TCGCCAAGGC CGCCGGTGGC
AGCTGGTACG CCGGTCAGCC GACCAGCAAC TACGTGGTGC AGATCCTCGG TACCAGCTCC
GAAGCGACCG CGCAAAACTT CGTCAAGGAG CAGGGCGGCG AGTACCGTTA TTTCAAGAAA
GTCCTCAACG GCAAGCCTCT CTACGTGATC ACCTACGGCA ACTTCGCCAA TCGTGATGCA
GCCGTTTCTG CCATCAAGGC CTTGCCAGCG AAGGTTCAGG CTGGTAAACC TTGGCCTCGC
ACTGTCGCCA GCGTCCAACA GGAACTGGCA ACAACTCGCT GA
|
|---|
| Protein sequence | MTSLHADEAF LGHFQLSHDP FAPRVPGFKF FPAQRKPVLG QLHHLARYSQ LLLVVTGPQG
SGKTLLRQAL VASTNKQSVQ SVVVSARGAG DAAGVLRQIA QALDVAQAEV GAILDQVVQL
ALTGQEVYLL VDDAEQLDES ALEALMALGA GAPEGRPHVF LFGESSLIAQ LEALHLEEER
FHVIELQPYT EEETREYLDQ RLEGAGRGVE LFTADQISDI HESSEGWPGN INQVARDALI
EVMIASRSAV KRPSMGFNMP KKHVLAISAV VVVAVAAAWL MPGRNKAPTT GAPANEQAQL
PLGQGAPQAG GAPSVEFNGN TQPMPLPLVG NSQPVMRGPL AEAAGGITEG DDGVPVEGSS
NTPPTVTTTA PPAGVQAGPA PTPVPVPVPA AKPTPAPTQV ATAKPAPAAP VAKPAPAPAK
PVAAAKPAEK PVTVAKAAGG SWYAGQPTSN YVVQILGTSS EATAQNFVKE QGGEYRYFKK
VLNGKPLYVI TYGNFANRDA AVSAIKALPA KVQAGKPWPR TVASVQQELA TTR
|
|---|
| |