Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0402 |
Symbol | |
ID | 3712488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 456586 |
End bp | 457368 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | nuclease (SNase-like) |
Protein accession | YP_346135 |
Protein GI | 77456630 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.384971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGG CGTCCCTTGC GGGCGCCTTT TTTGTGTCCG CGATTTGGCT CTCCGCCGCC CAGGCCTTCT GCCCCGTGCC GGCCAGGCTG GACAGCGCCA CGGTGCAGCG GGTGGTCGAC GGCGACACCC TGCGCCTGAG CGACGGGCGC AATGTGCGGA TGATCGGCCT CAATACGCCC GAACTCGGCA AGCAGGGTCG TAGCGACGAG CCGTTTGCGG TAGCGGCGCG CAAGCGCCTG GAAGCCCTGG TCGCCGAGAG CGACGGGAGG GTTGGTCTGC GACTGGGCGC CGAGTCCAAG GACCGTTACG GCCGAACCCT GGCCCATGTG TTCAGCGCCA AGGGTGAGAA CATCGAAGCG CAGATGCTCG CCGATGGTCT CGGTTTTCAG GTCGCGGTGG CGCCGAATGT CGATCTGGTC GATTGCCAGC AAGCGGCCGA ACACCGCGCG CGACAGGCCG GGCTCGGCCT GTGGAAGCGC TCACCTGTAC TGAAAGCGGA GCAGATCGAG CGCTCGGGTT TCGCGCTGGT CAGCGGTCGT GTGAGCAAGG TTCAACGCAA TCGCGGCGGA ATCTGGATCG AGTTGCAGGA CAAGCTTGTA CTGCGCGTTG CACCCAATCT GCTGGATCGC TTCGATGGCG CTGCTCTGCA GGCGTTGAAG GGCAAGCAGA TCGAGGCCCG TGGCTGGGTG GTCGACCGTT CCCGGCGCGG TGGACTGAAA TCAGGTCAGG CGCGCTGGCT GTTGCCGCTG ACCGATCCTT CGATGCTCCA GCCGTCCCGT TGA
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Protein sequence | MKKASLAGAF FVSAIWLSAA QAFCPVPARL DSATVQRVVD GDTLRLSDGR NVRMIGLNTP ELGKQGRSDE PFAVAARKRL EALVAESDGR VGLRLGAESK DRYGRTLAHV FSAKGENIEA QMLADGLGFQ VAVAPNVDLV DCQQAAEHRA RQAGLGLWKR SPVLKAEQIE RSGFALVSGR VSKVQRNRGG IWIELQDKLV LRVAPNLLDR FDGAALQALK GKQIEARGWV VDRSRRGGLK SGQARWLLPL TDPSMLQPSR
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