Gene Pfl01_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0402 
Symbol 
ID3712488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp456586 
End bp457368 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID 
Productnuclease (SNase-like) 
Protein accessionYP_346135 
Protein GI77456630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.384971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG CGTCCCTTGC GGGCGCCTTT TTTGTGTCCG CGATTTGGCT CTCCGCCGCC 
CAGGCCTTCT GCCCCGTGCC GGCCAGGCTG GACAGCGCCA CGGTGCAGCG GGTGGTCGAC
GGCGACACCC TGCGCCTGAG CGACGGGCGC AATGTGCGGA TGATCGGCCT CAATACGCCC
GAACTCGGCA AGCAGGGTCG TAGCGACGAG CCGTTTGCGG TAGCGGCGCG CAAGCGCCTG
GAAGCCCTGG TCGCCGAGAG CGACGGGAGG GTTGGTCTGC GACTGGGCGC CGAGTCCAAG
GACCGTTACG GCCGAACCCT GGCCCATGTG TTCAGCGCCA AGGGTGAGAA CATCGAAGCG
CAGATGCTCG CCGATGGTCT CGGTTTTCAG GTCGCGGTGG CGCCGAATGT CGATCTGGTC
GATTGCCAGC AAGCGGCCGA ACACCGCGCG CGACAGGCCG GGCTCGGCCT GTGGAAGCGC
TCACCTGTAC TGAAAGCGGA GCAGATCGAG CGCTCGGGTT TCGCGCTGGT CAGCGGTCGT
GTGAGCAAGG TTCAACGCAA TCGCGGCGGA ATCTGGATCG AGTTGCAGGA CAAGCTTGTA
CTGCGCGTTG CACCCAATCT GCTGGATCGC TTCGATGGCG CTGCTCTGCA GGCGTTGAAG
GGCAAGCAGA TCGAGGCCCG TGGCTGGGTG GTCGACCGTT CCCGGCGCGG TGGACTGAAA
TCAGGTCAGG CGCGCTGGCT GTTGCCGCTG ACCGATCCTT CGATGCTCCA GCCGTCCCGT
TGA
 
Protein sequence
MKKASLAGAF FVSAIWLSAA QAFCPVPARL DSATVQRVVD GDTLRLSDGR NVRMIGLNTP 
ELGKQGRSDE PFAVAARKRL EALVAESDGR VGLRLGAESK DRYGRTLAHV FSAKGENIEA
QMLADGLGFQ VAVAPNVDLV DCQQAAEHRA RQAGLGLWKR SPVLKAEQIE RSGFALVSGR
VSKVQRNRGG IWIELQDKLV LRVAPNLLDR FDGAALQALK GKQIEARGWV VDRSRRGGLK
SGQARWLLPL TDPSMLQPSR