Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0227 |
Symbol | |
ID | 3712080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 267221 |
End bp | 268018 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_345960 |
Protein GI | 77456455 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.244915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAT TGATCGAGTT TCAGGGCTTC AACAAATTCT TCGGTGAACA GCAGGTGCTC AAGGGCATCG ACCTGCAAGT GAAATCCGGC GAAGTCATCG TCGTCCTCGG CCCCAGCGGC TGCGGCAAAA GCACTCTGCT GCGTTGTCTG AACGGCCTGG AAACCGCCCA CAGTGGCTCT CTGAAATTCG CCGGCCGCGA ATTGCTGGAC AAGGCCACCG ACTGGCGCGA AGTGCGTCAG CAGATCGGCA TGGTGTTCCA GAGTTATCAC CTGTTTCCGC ACATGAGCGT GCTCGACAAT TTGCTGCTCG GCCCGCTCAA GGTGCAGAAG CGCGAACGCC GCGAAGCACA GCAACAAGCC GAAGCGTTGC TTGAGCGCGT GGGCCTGGCG GACAAGTGCG ACGCTTTCCC GCGCCAGCTC TCCGGCGGCC AGCAGCAACG CATCGCCATT GTCCGCTCGC TGTGCATGAA CCCGCGGGTC ATGCTCTTCG ACGAAGTCAC CGCCGCCCTC GACCCAGAGA TGGTCAAGGA AGTGCTGGAA GTGATTCAGG GGCTGGCCCG CGAAGGCATG ACCCTGTTGA TCGTCACCCA CGAGATGGCC TTCGCCCGCG CGGTGGCCGA TCGCATCGTG TTCATGGATG CCGGGCGCAT CCTTGAACAG AACCCGCCCG AGCTTTTCTT TACGAACCCG CAAACCGCAC GCGCGCAGCA GTTCCTGGAG AAGTTCTCCT ACGTCGAAGC GCTGACTTCA ACGACTTCGC CCACAACGTC TCAAACCAAG GAACTGGAAC TGCCATGA
|
Protein sequence | MSALIEFQGF NKFFGEQQVL KGIDLQVKSG EVIVVLGPSG CGKSTLLRCL NGLETAHSGS LKFAGRELLD KATDWREVRQ QIGMVFQSYH LFPHMSVLDN LLLGPLKVQK RERREAQQQA EALLERVGLA DKCDAFPRQL SGGQQQRIAI VRSLCMNPRV MLFDEVTAAL DPEMVKEVLE VIQGLAREGM TLLIVTHEMA FARAVADRIV FMDAGRILEQ NPPELFFTNP QTARAQQFLE KFSYVEALTS TTSPTTSQTK ELELP
|
| |