Gene Pfl01_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0227 
Symbol 
ID3712080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp267221 
End bp268018 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_345960 
Protein GI77456455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.244915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAT TGATCGAGTT TCAGGGCTTC AACAAATTCT TCGGTGAACA GCAGGTGCTC 
AAGGGCATCG ACCTGCAAGT GAAATCCGGC GAAGTCATCG TCGTCCTCGG CCCCAGCGGC
TGCGGCAAAA GCACTCTGCT GCGTTGTCTG AACGGCCTGG AAACCGCCCA CAGTGGCTCT
CTGAAATTCG CCGGCCGCGA ATTGCTGGAC AAGGCCACCG ACTGGCGCGA AGTGCGTCAG
CAGATCGGCA TGGTGTTCCA GAGTTATCAC CTGTTTCCGC ACATGAGCGT GCTCGACAAT
TTGCTGCTCG GCCCGCTCAA GGTGCAGAAG CGCGAACGCC GCGAAGCACA GCAACAAGCC
GAAGCGTTGC TTGAGCGCGT GGGCCTGGCG GACAAGTGCG ACGCTTTCCC GCGCCAGCTC
TCCGGCGGCC AGCAGCAACG CATCGCCATT GTCCGCTCGC TGTGCATGAA CCCGCGGGTC
ATGCTCTTCG ACGAAGTCAC CGCCGCCCTC GACCCAGAGA TGGTCAAGGA AGTGCTGGAA
GTGATTCAGG GGCTGGCCCG CGAAGGCATG ACCCTGTTGA TCGTCACCCA CGAGATGGCC
TTCGCCCGCG CGGTGGCCGA TCGCATCGTG TTCATGGATG CCGGGCGCAT CCTTGAACAG
AACCCGCCCG AGCTTTTCTT TACGAACCCG CAAACCGCAC GCGCGCAGCA GTTCCTGGAG
AAGTTCTCCT ACGTCGAAGC GCTGACTTCA ACGACTTCGC CCACAACGTC TCAAACCAAG
GAACTGGAAC TGCCATGA
 
Protein sequence
MSALIEFQGF NKFFGEQQVL KGIDLQVKSG EVIVVLGPSG CGKSTLLRCL NGLETAHSGS 
LKFAGRELLD KATDWREVRQ QIGMVFQSYH LFPHMSVLDN LLLGPLKVQK RERREAQQQA
EALLERVGLA DKCDAFPRQL SGGQQQRIAI VRSLCMNPRV MLFDEVTAAL DPEMVKEVLE
VIQGLAREGM TLLIVTHEMA FARAVADRIV FMDAGRILEQ NPPELFFTNP QTARAQQFLE
KFSYVEALTS TTSPTTSQTK ELELP