Gene Pfl01_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0215 
Symbol 
ID3717566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp256125 
End bp257069 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content62% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_345948 
Protein GI77456443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCG ACTTGCGCCA GCTCAGACAC TTCATCGCCC TCGCCGAACA ACGCAGTTTC 
GTCGCCGGCG CGCAGGCGGT GAACCTGTCG CAGTCGGCGT TCAGCCGCAG CATTCAGGCG
CTGGAGCACA GCGTCGGTTG TCAGTTGGTG GATCGCGGGC GCAAGGAATT GCCGCCGACC
AAACAGGGCC AGGTGCTGCT TGAACATGCG CGGCGCCTGG TCAGCGGTGC GCAGCAGATG
GCCAACGAGA TCAGCCAGTT CAACGGGCTG GAGGCTGGGG AATTGCGCTT CGGTTGTGGC
CCGGCGCCGG CAGCGGGATT AATCCCGCGA GCGATCGGCA GCTTCATCGG CCGCTACCCG
AAAGCGCGGG TGCATTACCA GGTCGATGAC TGGCAGAGCC TGAGCAAACG GCTGCTGAGC
GAAGAGTTCG AATTCTTCGT TGCCGACACC CGACATTTCG AGGCCGACCC GGATTATCTG
ACCCACCGCT TGCGGCCACG CAAATGGCAT TTCTGCTGTC GCGCCGGGCA TCCGCTGGGC
GCTTTCGAGC GAGTCACGGC AGAGCAATTG ATGAGTTATC CACTGGCCGT CAGCATTCGT
CCGCCAAACC TGCGCAAGGT CATCGTTGAC CTCAGTGGCC GGCCGGATTT CGTCCCGAAT
GTGGAATGTG AAAACAGCGC CAGCCTGCTC GGCGTGGTGC TGCGCTCCGA TGCGATCGGC
ATCGTCGGTG CCTATTCAGA TGCACTGCAT CAAGCCCGGG GTGAACTGGT TTGCTTGAAG
GTCGAAGGGT TAGCGGATGA TCTGGAGGAG CTTTACACCC GTTACGGAAT TGTCAGCCGC
GCCGGGTATC GGCTGTCGCC GTTGGCCGAG GCGATGATCG AGCAGATCAA GGCGATCGAT
GCGGTGGAAG AAGAGGTGTG CTCACTGGCG AACCTCGCCG TCTGA
 
Protein sequence
MHIDLRQLRH FIALAEQRSF VAGAQAVNLS QSAFSRSIQA LEHSVGCQLV DRGRKELPPT 
KQGQVLLEHA RRLVSGAQQM ANEISQFNGL EAGELRFGCG PAPAAGLIPR AIGSFIGRYP
KARVHYQVDD WQSLSKRLLS EEFEFFVADT RHFEADPDYL THRLRPRKWH FCCRAGHPLG
AFERVTAEQL MSYPLAVSIR PPNLRKVIVD LSGRPDFVPN VECENSASLL GVVLRSDAIG
IVGAYSDALH QARGELVCLK VEGLADDLEE LYTRYGIVSR AGYRLSPLAE AMIEQIKAID
AVEEEVCSLA NLAV