Gene Pfl01_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0200 
Symbol 
ID3717551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp239753 
End bp240163 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content59% 
IMG OID 
Producttransthyretin 
Protein accessionYP_345933 
Protein GI77456428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAC TGCGCATCAC TTTCGCCGCG CTCGGCCTGA GCGCCTTTTC GAGCCTGGCG 
CTGGCCGCCG GCAACCCGCT GAGCGTACAC GTGCTCAATC TGGAAAACGG CCTGCCGTCG
CCGGGCATCA ACGTGACGCT GGAACGTCAT GTCGGCCAGA ACTGGCAGCC GCTGGCGCAG
GGCACCACCA ATGAACAGGG ACGGATCGCC GAATTGTTCC CGGCGAACAA ACCGTTCGAG
GCCGGTGAGT ATCGAGTGGT GTTCAAGACC GGTGAGTACT TCGAGAAGAC GAAGCACGAG
ACGTTTTTTC CGGAGATTCC GGTGATCTTT AAAGTGCAGC AGACGGATCA GCACTATCAC
ATTCCGTTGC TGCTGAGTCC GTATGGCTTC TCCACTTATC GCGGTTCGTA A
 
Protein sequence
MTPLRITFAA LGLSAFSSLA LAAGNPLSVH VLNLENGLPS PGINVTLERH VGQNWQPLAQ 
GTTNEQGRIA ELFPANKPFE AGEYRVVFKT GEYFEKTKHE TFFPEIPVIF KVQQTDQHYH
IPLLLSPYGF STYRGS