Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0200 |
Symbol | |
ID | 3717551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 239753 |
End bp | 240163 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | transthyretin |
Protein accession | YP_345933 |
Protein GI | 77456428 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCAC TGCGCATCAC TTTCGCCGCG CTCGGCCTGA GCGCCTTTTC GAGCCTGGCG CTGGCCGCCG GCAACCCGCT GAGCGTACAC GTGCTCAATC TGGAAAACGG CCTGCCGTCG CCGGGCATCA ACGTGACGCT GGAACGTCAT GTCGGCCAGA ACTGGCAGCC GCTGGCGCAG GGCACCACCA ATGAACAGGG ACGGATCGCC GAATTGTTCC CGGCGAACAA ACCGTTCGAG GCCGGTGAGT ATCGAGTGGT GTTCAAGACC GGTGAGTACT TCGAGAAGAC GAAGCACGAG ACGTTTTTTC CGGAGATTCC GGTGATCTTT AAAGTGCAGC AGACGGATCA GCACTATCAC ATTCCGTTGC TGCTGAGTCC GTATGGCTTC TCCACTTATC GCGGTTCGTA A
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Protein sequence | MTPLRITFAA LGLSAFSSLA LAAGNPLSVH VLNLENGLPS PGINVTLERH VGQNWQPLAQ GTTNEQGRIA ELFPANKPFE AGEYRVVFKT GEYFEKTKHE TFFPEIPVIF KVQQTDQHYH IPLLLSPYGF STYRGS
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