Gene Pfl01_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0189 
Symbol 
ID3717540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp228363 
End bp229574 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content65% 
IMG OID 
Productsignal transduction protein 
Protein accessionYP_345922 
Protein GI77456417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG TCGATTTACC CGCTGTACCC CGAGTGCTGA TTGCCGAGGC CGACCCGTGG 
TCTCGTGACC TGCTCAAACA AGTGTTGCTG AATGTGCGCT GCGATGCGCG GCTGGACCTG
TGCGCCGATG GCCAGGAGGC AATGACGCTG CTCAGCGAAG TCCCTTATGA CTTGGCGATC
GTCGACTGGG AGTTGCCCGG CGTCGATGGC TTGAGCGTGT TGCGCAGTGT CCGCCAGCGC
AAACGCAATC CGCCGCTGCC GTTCATTCTG ATGAGCAGTC GCAACGACAG CGCCAGCGTG
CGCGAAGCCT TGCCGCTGGC GCCGACAGCC TACCTGGCCA AACCCCTGAA CATGGAAAGC
CTGACCGAGC GTTTGCAAGG GCTGCTGCTC AATGCCGGCG AGGAAGTATT CTGTGAAGTG
CCTGCACTGG CGCCAGGCAT GACCCTCTCG GTGTTCCTCG AACGCCGCCG CGAGCAGGCC
GACGGCGCAC CGCTGATGAC CGACGTGCAG GTGGCGGTCA AGCGCAGCCT CAATCCCAAC
GGCTTGGACC TGAAGCTGCT GGAAGAGGAA ATCCGCACCG ATCCGCAGAT CACCGCCGTG
TTGATCGCCG CCGCCAACAG CGCCGCCCAG CACCATGGCG CGCCGGTGCA GACCCTGGCG
CAGGCGCTGC ATCGTCTGGG CACCGGGCAG AGCATGAATC TGATTCTTGG CCTTGCACTC
AAACGCAGCG CCCGGCTCAG CGACCCATGC CTGGCGGATT ACGCCGAGCG CTATTGGGGC
CTGTCGCTGC ACACCGCCGA GTACGCCCGT ACGCTGGCGC GGCTGCTCGA TCTGGATCAG
GAGCGCTGCT ACTGCGCCGG GATGCTCCAT CGCCTCGGCG ATCTCGCGTT GCTGCGTTGT
CTTCAAGAGT GGAAGCAGGC CGGCGGTGAG CTGGATGAAC TGGAGGAAGT CGGCGATGCG
CTGGCGGAAT TCGGTGCGGC GTACGGTTCG GCGTTGCGCA CCCGCTGGCG GTTGCCGCTG
GAGCTGCGCG AGCTGATTGC CTCGGTCTAC CAGCTCGGTG GCGGGGTCTA TTCCCGCGAG
GCGCTGGTGA TGAACATGGC GGCGCAGATG GCGCGGCTGA CCGAGCATGA GGGCGTTGAG
GAGCTGGCGA AGAGCCGCAC GGCGCGGTTG CTCAAGATCG GCCTGCCGGA GCTGATGCGG
ATGCGCAAAT AG
 
Protein sequence
MTAVDLPAVP RVLIAEADPW SRDLLKQVLL NVRCDARLDL CADGQEAMTL LSEVPYDLAI 
VDWELPGVDG LSVLRSVRQR KRNPPLPFIL MSSRNDSASV REALPLAPTA YLAKPLNMES
LTERLQGLLL NAGEEVFCEV PALAPGMTLS VFLERRREQA DGAPLMTDVQ VAVKRSLNPN
GLDLKLLEEE IRTDPQITAV LIAAANSAAQ HHGAPVQTLA QALHRLGTGQ SMNLILGLAL
KRSARLSDPC LADYAERYWG LSLHTAEYAR TLARLLDLDQ ERCYCAGMLH RLGDLALLRC
LQEWKQAGGE LDELEEVGDA LAEFGAAYGS ALRTRWRLPL ELRELIASVY QLGGGVYSRE
ALVMNMAAQM ARLTEHEGVE ELAKSRTARL LKIGLPELMR MRK