Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0040 |
Symbol | |
ID | 3717476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 44039 |
End bp | 44665 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | putative lipoprotein |
Protein accession | YP_345773 |
Protein GI | 77456268 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.236399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.184271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGA CTCGCCTCGC CCTCCTCGCC GGCTTCACGT TGATCAGCGC ATGCTCGATC CTGCCCAAGT CCGAACCGCT GGACGTCTAC CGTTTGCCAG CCGCACAGGC GCCCGCCTCG GCCGGTTCGT CGGCGACTCA GCATTGGTCG CTGCGCCTGA ACAAACTGCA GGCCAGCGAA GCGCTGAACC GACCAAGCAT CGCGGTGATT CCTCAGGGCG ATGTGATCAG CAGCTACAAG GCCTCGCGCT GGAGCGATCC GGCGCCGGTG CTGGTGCGTA ACCGCTTGCT CGATGGTTTT CAGCGCGATG GCCGGGTATC GCTGTTGAGC ACCGACGACA GCAATTTCCA GGCAGACCTG GAACTGGGCG GCAGCCTGCA GGCGTTTCAG ACCGAGTATC AGGGCACACA GGCCAGCGTG GTGGTGCGTG TCGATGCGTT GCTGGTGCGC GGTTACGACC AGCGGATTCT CGCCAGTCGC CGCTTTGAAG AGCGCCAGCC GCTGAGCGAT GTGCAGGTGC CGGCGGTAGT GGCCGGATTC GGTCAGGCCA GTGATCGCCT CACCGCGAAG GTGGTGGCGT GGGCGGTGGA GCAAGGGCAG AAGGTTGCCC CACCTGCCCG GCCTTGA
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Protein sequence | MKLTRLALLA GFTLISACSI LPKSEPLDVY RLPAAQAPAS AGSSATQHWS LRLNKLQASE ALNRPSIAVI PQGDVISSYK ASRWSDPAPV LVRNRLLDGF QRDGRVSLLS TDDSNFQADL ELGGSLQAFQ TEYQGTQASV VVRVDALLVR GYDQRILASR RFEERQPLSD VQVPAVVAGF GQASDRLTAK VVAWAVEQGQ KVAPPARP
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