Gene RSP_4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_4159 
Symbol 
ID3711877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007490 
Strand
Start bp18722 
End bp19732 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content62% 
IMG OID640069497 
Productisopropylmalate/homocitrate synthase 
Protein accessionYP_345364 
Protein GI77404792 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAA AACGAACCCT CATCAACGAC GCAACGCTGC GCGAAGGGAA TCAGGCTTCG 
GGCGTAAGGT TCAGCGTACA CGACAGCGTA GCCATTGCCA CCGCGCTTGA CGGGATCGGC
GTCGACATGA TCGAGATCGG TCACCCGCTC GCCGGACCAT ACGAGCACCA GCGCACCGAG
GCCGTTGCGA AGCTCGGGCT CGGCGCAAAG ATCATTGCGC ACGCCCGTGC ACATCGCACC
GATATTGAGG CCGTCAGCCG TACCGGGGCC ACTTGGGTCG GGATCTTCCT GGGTGTCAAC
GACATCACGA CGAAGGCCCG GGTGATCGGT CGCAGCACCA CGGAACTGAT CCGAATGGTC
GCCGACGCGG TGAAGGTCGC CAAGGATTGC GGCTTGAACA TCCGCTACAG TTGCGAAGAT
GCTAGCCGCA CCAACACACT GTTCCTAGTG GACGTGTTCG GCGCGGCGAT CGACGCAGGC
GCCGACCGCA TTTGCTACGC CGATACGCTC GGAATCGCCG AGCCTGCCGA AGTTGCGCGC
AAGGTCACCC TGATGAAGTC CGAATTCCCC GATGCGGAGG TGGAGGTGCA TCTGCACGAC
GACCGCGGCC TCGCCATGGC CAACTCGCTC GCCGCGATCG ACGCCGGTGT CGACTCTATA
TCCGTCTCGG TGAATGCGTT GGGCGAGCGC TGCGGCATCA CGGACCTAGC GACCTTACTC
GTCAATCTTG GATTTCGAGG CGAGCGCGCA CTGCCCGACA TCTCGGAGCT TCGAGCACTG
TCACGATTGG TCGCCATGTC ATCGAATACG CCCTTCGACG CGCTGCGGCC GATCGTCGGC
GACAACGCGT TCAAGCATGG ATCAAAACTT CACCAACGCG CCACGCAGTA CGAGCCGCGT
GCCTACGACT GGATCAAGGA GTTCATCTAC AGACATGATC AGCAGGCCGT TGGGCAGGCA
CCTGGCGAGG AACCGTCGGC TCCCGACCAA ACGGTCAGCG AAATTTCGTA G
 
Protein sequence
MQRKRTLIND ATLREGNQAS GVRFSVHDSV AIATALDGIG VDMIEIGHPL AGPYEHQRTE 
AVAKLGLGAK IIAHARAHRT DIEAVSRTGA TWVGIFLGVN DITTKARVIG RSTTELIRMV
ADAVKVAKDC GLNIRYSCED ASRTNTLFLV DVFGAAIDAG ADRICYADTL GIAEPAEVAR
KVTLMKSEFP DAEVEVHLHD DRGLAMANSL AAIDAGVDSI SVSVNALGER CGITDLATLL
VNLGFRGERA LPDISELRAL SRLVAMSSNT PFDALRPIVG DNAFKHGSKL HQRATQYEPR
AYDWIKEFIY RHDQQAVGQA PGEEPSAPDQ TVSEIS