| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_4023 |
|---|
| Symbol | repA3 |
|---|
| ID | 3712038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007488 |
|---|
| Strand | + |
|---|
| Start bp | 20487 |
|---|
| End bp | 21665 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640069316 |
|---|
| Product | ATPase, ParA type |
|---|
| Protein accession | YP_345183 |
|---|
| Protein GI | 77404609 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | [TIGR03453] plasmid partitioning protein RepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.845906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTGA AGGAACGGAT CGACCGCCTT GTGGGCGATC ATGCGGCGCG CCTGTCGGAG
CGGCTGATGG CCCACCGGGC GCAGCTCTTC CCCCCGAACG CCCGCAAGGA GCTCCGGCGC
TTCACCTCGG GCGAGGTGGC GGCCCTGCTC GGCGTCAAGG ATGCCTATCT GCGCAAGCTC
AGCCTCGAGG GCCGCGGCCC GCAGCCCGAA ACGGGGCCCG GCGGACGCCG CCTCTACCGC
TCCGACGACA TCATGGAGCT GCGCACGCTG CTCGAGAAGC GCGCCAAGGC GCCCGGCACC
TACCTGCCGG GCCGGCGCGA GGGCGACCAT CTTCAGGTCA TCACCGTGAT CAATTTCAAG
GGCGGCTCGG GCAAGACCAC GACCGCCGCC CACCTCGCGC AGAAACTGGC GCTCGACGGC
TACCGGGTGC TGGCCATCGA TCTCGATCCC CAGGCCTCGC TGTCGGCACT GCACGGATTC
CAGCCGGAAT TCGACCTGCT CGATGGCGGC ACCCTCTACG ATGCCATCCG CTACGAAGAT
CCGCTGCCGC TCTCGTCGGT GGTGCAGAAA ACATATTTCA CCGGGCTCGA CATCGTGCCG
GGAAATCTCG AACTGATGGA ATTCGAGCAT GACACGCCCC GCGCCCTCTC CGTGCGCGGC
GGCAACCTTT TCTTCACCAG GATTTCGGAT GCCTTGGCGG AGATCGAATC CGACTACGAC
CTTGTGGTGA TCGACTGCCC GCCGCAGCTG GGGTTCCTCA CCATGTCCGC CCTCTCCGCG
GCGACGGCCG TGCTCGTCAC CGTCCACCCC CAGATGCTCG ATGTCATGTC CATGTGCCAG
TTCCTGCTCA TGACCTCCAA CCTGCTCGGC GTGGTCGCCG ACGCGGGCGG CGACATGAGC
TACGACTGGA TGCGTTATCT CGTTACCCGC TACGAGCCGG GCGACGGGCC GCAGAACCAG
ATGGTGAGCT TCATGCGCTC GCTGTTCGGC GACCATGTGC TGAACCATCC GGTGCTGAAA
TCGACCGGCA TCTCGGACGC GGGCCTGACC AAGCAGACGC TCTACGAGGT GGAGAAAAGC
GATTTCACCC GCTCGACCTA CGAACGCGCG ATGGAGAGCC TGAACGCGGT GAACAAGGAG
ATCGAGGGGC TGATCCAGAC CGCCTGGGGG CGCACATGA
|
|---|
| Protein sequence | MQVKERIDRL VGDHAARLSE RLMAHRAQLF PPNARKELRR FTSGEVAALL GVKDAYLRKL
SLEGRGPQPE TGPGGRRLYR SDDIMELRTL LEKRAKAPGT YLPGRREGDH LQVITVINFK
GGSGKTTTAA HLAQKLALDG YRVLAIDLDP QASLSALHGF QPEFDLLDGG TLYDAIRYED
PLPLSSVVQK TYFTGLDIVP GNLELMEFEH DTPRALSVRG GNLFFTRISD ALAEIESDYD
LVVIDCPPQL GFLTMSALSA ATAVLVTVHP QMLDVMSMCQ FLLMTSNLLG VVADAGGDMS
YDWMRYLVTR YEPGDGPQNQ MVSFMRSLFG DHVLNHPVLK STGISDAGLT KQTLYEVEKS
DFTRSTYERA MESLNAVNKE IEGLIQTAWG RT
|
|---|
| |