Gene RSP_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3999 
SymbolproW 
ID3711788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp49168 
End bp50109 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content68% 
IMG OID640069339 
Productglycine betaine/L-proline ABC transporter inner membrane protein 
Protein accessionYP_345206 
Protein GI77404632 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4176] ABC-type proline/glycine betaine transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGG AGCGCACCTT CAGCCTGCTC GATCCGTTCC GCAGCATCGA TCTCGACATC 
GACGGGCGCA CCGACGGCAT CAAGCAATGG GCCATCGCCA ACCGCACGGC GCTGCAGCCG
ATCAAGTCCT TCTTCGACGG GCTGATCGGC TGGATCGAGA ACCTGATGCA GTCGATCCCG
CCCACCGTCA TGCTGCTGCT GATCGTGCTG GTGGCCTGGC AGGCGGCGGG GGGACGGGTG
GCCCTCGTCG TGGCCGCGGC GCTGGTGGCG CTGGGGCTTC TGTCGCCCGA CGCCTGGTCG
CTCGCCATGA CCACGCTCGC CATCGTCAAT GCGGCCGTGG CGCTCTGCGT CATCATCGGC
CTGCCGCTCG GCGTGCTCGC GGGCAAGAGC GACCGGTTCG AGGCGGCGGT CCGGCCGTTC
CTCGACACGA TGCAGACCAT CCCGGCCTTC GTCTATCTGG TGCCCGTGGT GATGCTGCTC
GGGATCGGCA ATGTCTCGGG CGTGATCGTC ACCATCATCT TCGCGCTGCC GCCCTTGGTG
CGCCTCACCT CGCTCGGCAT CCGCAGCGTG AATCCCGGCG TCGTCGAGGC CGCGCGCGCC
TTCGGCGCCA CGCCGCGCCA GATCCTGTTC AAGGTCGAGC TGCCGCTCGC CACGCCCACG
ATCCTCGCGG GGCTGAACCA GACGATCATG CTGTCGCTGT CCATGGTGGT GATCGCCTCG
ATGATCTCGG TCAAGGGCCT CGGAAACGAG GTGCTGCGCG CCATGGGCCG GCTCGATGCG
GGCAAGGCCA TCGTGGGCGG TCTCGGCATC GTCATCCTCG CCATCGTTCT CGACCGCGTG
ACGCAGGGTC TCGGCCGCTC GGGCCGCGCC CGCAACCACC GCCACTGGTG GCAGGAGGGG
CCGGTGGGCC TCGTCATGCG CCTGTTTCAC AAGAGCGTCT GA
 
Protein sequence
MAEERTFSLL DPFRSIDLDI DGRTDGIKQW AIANRTALQP IKSFFDGLIG WIENLMQSIP 
PTVMLLLIVL VAWQAAGGRV ALVVAAALVA LGLLSPDAWS LAMTTLAIVN AAVALCVIIG
LPLGVLAGKS DRFEAAVRPF LDTMQTIPAF VYLVPVVMLL GIGNVSGVIV TIIFALPPLV
RLTSLGIRSV NPGVVEAARA FGATPRQILF KVELPLATPT ILAGLNQTIM LSLSMVVIAS
MISVKGLGNE VLRAMGRLDA GKAIVGGLGI VILAIVLDRV TQGLGRSGRA RNHRHWWQEG
PVGLVMRLFH KSV