| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3997 |
|---|
| Symbol | |
|---|
| ID | 3711790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007488 |
|---|
| Strand | + |
|---|
| Start bp | 51181 |
|---|
| End bp | 52131 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640069341 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_345208 |
|---|
| Protein GI | 77404634 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.564896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGGA CCTCCCCTTT CGTCTTCCTT CTCGTCGAGA ACTTTTCCCA TATCGCCTTC
TCCTGCGCGC TCGAGCCCCT GCGCATCGCC AACCTGCTGG CGGGGCGCGA GCTCTACCGC
TGGTCTCTGG CCAGCGAGGA CGGCGCCACC GCCACCTGCT CGAACCGCTG CGTGACGCTC
GTCCACCGCG GGCTCGAGCC GCTCGCGCGC GGCGACCGGC TGTTCCTGAT CTCGGGCCTC
CGCGTCCAGC ATCACACGAC GCCGGCCGTG CTCTCCTTCC TGCGGCGCGA GCGGGCAGCG
GGCACGCCCA TCGGCGCTAT CTGTTCGGGC GCCTATGTGC TCGCGCGGGC CGGGTTCCTC
ACCGGGGTGC GGACCGCGGT CCACTGGGAG TTTCACGATC TCTTCGCCGA GGACTTCCCC
GAGGTGGCCC TCGTGCGCAA CGTCTTCGTG CCCGACGAGC GGTTCGTGAC CGCCTCGGGG
GGGACGGCCG CGGCCGATCT CATGCTGCAT CTGATCGCGC GCGAGCACGG TCGGGATCTG
TCCACGGCGG TGGCCGACCA GATGGTCTAC ACGGCGGTGC GCGAGGGCAC GGCCGCGCAG
CGGGTGTCGC TCCAGTCGCG CCACGGGATG CGGAACGCGC ATCTTTCGCG GGCCATCGCG
CTGATGGAAG CCCATGTCGA GGAGCCGCTC AGCCCCTTCG CCCTCGCCGA CCGCCTCGGC
ATCTCGACCC GCCAGCTCGA GCGGCTGTTC GGCAGGTTCC TCAACACATC GCCCAAGCGC
TACATGATGG AGGTGCGGCT GACGCGGGCG CGCCACCTGA TCGTGCAGAC CGAGCAGTCG
ATCTCCGAGA TCGCGATGGC CTGCGGCTTC ACCTCCACCT CGCATTTCTC GAAGGTGTTT
CGCAGCCGCT ACGGGGTCGC GCCGGTCGCG CACCGCACGA CCCTTGGCTA G
|
|---|
| Protein sequence | MSGTSPFVFL LVENFSHIAF SCALEPLRIA NLLAGRELYR WSLASEDGAT ATCSNRCVTL
VHRGLEPLAR GDRLFLISGL RVQHHTTPAV LSFLRRERAA GTPIGAICSG AYVLARAGFL
TGVRTAVHWE FHDLFAEDFP EVALVRNVFV PDERFVTASG GTAAADLMLH LIAREHGRDL
STAVADQMVY TAVREGTAAQ RVSLQSRHGM RNAHLSRAIA LMEAHVEEPL SPFALADRLG
ISTRQLERLF GRFLNTSPKR YMMEVRLTRA RHLIVQTEQS ISEIAMACGF TSTSHFSKVF
RSRYGVAPVA HRTTLG
|
|---|
| |