| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3953 |
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| Symbol | gtpD |
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| ID | 3712030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007488 |
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| Strand | - |
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| Start bp | 99154 |
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| End bp | 99885 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640069385 |
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| Product | ABC amino acid transporter, inner membrane subunit |
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| Protein accession | YP_345252 |
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| Protein GI | 77404678 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.801361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACCTGC TTTACGAATA TCGCGTCTTC CTGCTCGGCG GACTGATCGA GACGCTGAAG
ATGTCGGCGG TCGTGGCGAT GGGCGGCACC TTCTGCGCCA TCCTCCTCAC CATGGGCATC
ACGGCCAAAC CGCGGCTTCT GAACCGCGCG AGCTATGCGC TGGTCGAGCT GCTGCGCGAC
CTGCCGCTGA TGGTGACGGT GCTGCTCGTC TATTTCATGC TGCCCATGAC GGGGCTCGGG
CTCAATCCGT TCTGGTCCTG CTGCCTCGCG ATCTCGGTCT GGGGCGGCGC CAACGGGGCG
CAGATCCTGC GCGCGGGGCT CGCCTCCGTG GGCCGGGGCC AGCGCGAGAC GGCGGCGGCC
TTCGGCTTCG GCCCGGTGAA GACGCTCCTC CTCGTGACGC TGCCGCAGGC GATGCCGGTG
ATCGTGCCGC CCTATGTGGG GCTTCTGACC GCGCTCGTGC AGGCCACGTC GCTCGGCGCG
GTGGTGGGGG CGCAGGAACT GCTGCGCACG GGCCAGGTGC TGATCGAGCA GACGACCATC
ATGCAGGGCG GCAGCCCGGC CTATCTCGTC TACGGTTCGA TCCTCGTGGT CTATTTCACC
CTCTGCACCC TGATCTCGCT GGTGGGCGGG CGCATCGAGC GCCATTTCCT GAAGCCCTAT
TCCGCCGCGA GCGGGGCGCA GGCCGAGGAC CGGGCGCATG AGATCGACGC CGCCCTCTCG
GTGAGGACCT GA
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| Protein sequence | MDLLYEYRVF LLGGLIETLK MSAVVAMGGT FCAILLTMGI TAKPRLLNRA SYALVELLRD
LPLMVTVLLV YFMLPMTGLG LNPFWSCCLA ISVWGGANGA QILRAGLASV GRGQRETAAA
FGFGPVKTLL LVTLPQAMPV IVPPYVGLLT ALVQATSLGA VVGAQELLRT GQVLIEQTTI
MQGGSPAYLV YGSILVVYFT LCTLISLVGG RIERHFLKPY SAASGAQAED RAHEIDAALS
VRT
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