Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3946 |
Symbol | |
ID | 3712057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | - |
Start bp | 105404 |
End bp | 106816 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640069392 |
Product | hypothetical protein |
Protein accession | YP_345259 |
Protein GI | 77404685 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCCT ACAGGCTGGC ACTTCCCGCC GCGGCGCCCG AGGGCGACCG CTCCTTCTGG CTCCGCGATC TGGGCGCAGG CCCCGCGACG CCGCCCTTCG CGGGCGAGGC CGCCTGCGAC GTGGCCATCG TCGGCGGCGG TTACACCGGC CTCTGGACGG CGCTGCGCCT GAAGGAGCAG GCGCCCGAGC TGCGCGTGAC GATCCTCGAG GCCGATTTCT GCGGCTCGGG CGCCTCGGGG CGGAACGGCG GGCAGGTCCA CAGCTGGTTC GCGGAGCTCG ACCTGCTGAC CCGCCTCGTC GGCGCCGAGG AGGCGCTGGC GCTCTGCCAT GCCACCGCCG AGGCCATCGA GGAGCTGGCG GAGCTGCAGG CCTCGGGCAC GATCGACATG GACCTGCGGC TCGACGGCTG GCTCTGGACG GCCAGCGCGC GGGCGCAGGA AGGCGCGTGG GAGCCCGCCG CCGATCTTTG CCGCAAGGCG GGCGAGGCCG ACCGGCTGCG GCCCGTGGGC GCGGAGGAGA TCCGCCGCCG CACCGGCTCG GGCGCCTCCT ACATGGGCGT GGTCGAGCCG CGCGCGGGCA CGGTGCAGCC CGCGAAGCTC GCCCTCGGGC TGCGGGCGCT GGCGCTGTCG CGGGGCGTCG CGATTCACGA GCGGAGCCCC GTGTCCGAGA TCGTGTCGGG CAGGCCCTGC CGGCTGCAGA CGCCGGGCGG CACGCTTCAG GCGGGCAAGG TGGTGATCGC CTCGAACGCC TGGGCCGCGG CGCTGCCCGA GCTCTCCCGC TACCTCTATG TGGTGGACAG CCAGATCGTC GCGACCGAGC CGGTGGCCGA GACGCTCGAC CGGCTGGGCT GGACGGGCGG CGAGTCGATC TGCGACGCGC AGGCCCATGT GCTCTATTAC CAGCGCACCA GGGGCGGGCG CGTGGTCTTC GGGCGCGGCA GCGGGAATGT GGCCTACGGC AACCGCTTCG GCGCGGCCTT CAACCGCCGG CCGGACGGCG GCGCCGACAA TCTGCGCGAG CTCTCCCGCG TCTATCCCGA ACTGCGGGGC GTGAAGATCG CGGCCGACTG GTCCGGCCCC ATCGACTGTT CGGCCGCGCA TCTGCCCGTC TTCGGCTCGC TCACGGGCGA GCCCGACATC CTGTTCGGCG TGGGCTTCAA CGGCACCGGC ATCGCCCAGA CGCCGGTCGC GGGCCGGATC CTCGCAAGCC TCGTGCTCGG GCAGGACGAC CGCTGGAGCC GGAGCGGCCT CGTGGGTCTT GCGCGCCGCC AGACGCTGCC GCCGGAGCCG GTGCGCACGC TGGGCGCGCG CCTCGTGCGC CGCGCCATCC GCATCCGCAA CGACCTCGAG ATCGAGAACC GGAGCCCGGG CCCGCTGGTG CGCTGGCTCT CGTCGCTCAC GCCCGGCCGG TGA
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Protein sequence | MASYRLALPA AAPEGDRSFW LRDLGAGPAT PPFAGEAACD VAIVGGGYTG LWTALRLKEQ APELRVTILE ADFCGSGASG RNGGQVHSWF AELDLLTRLV GAEEALALCH ATAEAIEELA ELQASGTIDM DLRLDGWLWT ASARAQEGAW EPAADLCRKA GEADRLRPVG AEEIRRRTGS GASYMGVVEP RAGTVQPAKL ALGLRALALS RGVAIHERSP VSEIVSGRPC RLQTPGGTLQ AGKVVIASNA WAAALPELSR YLYVVDSQIV ATEPVAETLD RLGWTGGESI CDAQAHVLYY QRTRGGRVVF GRGSGNVAYG NRFGAAFNRR PDGGADNLRE LSRVYPELRG VKIAADWSGP IDCSAAHLPV FGSLTGEPDI LFGVGFNGTG IAQTPVAGRI LASLVLGQDD RWSRSGLVGL ARRQTLPPEP VRTLGARLVR RAIRIRNDLE IENRSPGPLV RWLSSLTPGR
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