Gene RSP_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3946 
Symbol 
ID3712057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp105404 
End bp106816 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content75% 
IMG OID640069392 
Producthypothetical protein 
Protein accessionYP_345259 
Protein GI77404685 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCCT ACAGGCTGGC ACTTCCCGCC GCGGCGCCCG AGGGCGACCG CTCCTTCTGG 
CTCCGCGATC TGGGCGCAGG CCCCGCGACG CCGCCCTTCG CGGGCGAGGC CGCCTGCGAC
GTGGCCATCG TCGGCGGCGG TTACACCGGC CTCTGGACGG CGCTGCGCCT GAAGGAGCAG
GCGCCCGAGC TGCGCGTGAC GATCCTCGAG GCCGATTTCT GCGGCTCGGG CGCCTCGGGG
CGGAACGGCG GGCAGGTCCA CAGCTGGTTC GCGGAGCTCG ACCTGCTGAC CCGCCTCGTC
GGCGCCGAGG AGGCGCTGGC GCTCTGCCAT GCCACCGCCG AGGCCATCGA GGAGCTGGCG
GAGCTGCAGG CCTCGGGCAC GATCGACATG GACCTGCGGC TCGACGGCTG GCTCTGGACG
GCCAGCGCGC GGGCGCAGGA AGGCGCGTGG GAGCCCGCCG CCGATCTTTG CCGCAAGGCG
GGCGAGGCCG ACCGGCTGCG GCCCGTGGGC GCGGAGGAGA TCCGCCGCCG CACCGGCTCG
GGCGCCTCCT ACATGGGCGT GGTCGAGCCG CGCGCGGGCA CGGTGCAGCC CGCGAAGCTC
GCCCTCGGGC TGCGGGCGCT GGCGCTGTCG CGGGGCGTCG CGATTCACGA GCGGAGCCCC
GTGTCCGAGA TCGTGTCGGG CAGGCCCTGC CGGCTGCAGA CGCCGGGCGG CACGCTTCAG
GCGGGCAAGG TGGTGATCGC CTCGAACGCC TGGGCCGCGG CGCTGCCCGA GCTCTCCCGC
TACCTCTATG TGGTGGACAG CCAGATCGTC GCGACCGAGC CGGTGGCCGA GACGCTCGAC
CGGCTGGGCT GGACGGGCGG CGAGTCGATC TGCGACGCGC AGGCCCATGT GCTCTATTAC
CAGCGCACCA GGGGCGGGCG CGTGGTCTTC GGGCGCGGCA GCGGGAATGT GGCCTACGGC
AACCGCTTCG GCGCGGCCTT CAACCGCCGG CCGGACGGCG GCGCCGACAA TCTGCGCGAG
CTCTCCCGCG TCTATCCCGA ACTGCGGGGC GTGAAGATCG CGGCCGACTG GTCCGGCCCC
ATCGACTGTT CGGCCGCGCA TCTGCCCGTC TTCGGCTCGC TCACGGGCGA GCCCGACATC
CTGTTCGGCG TGGGCTTCAA CGGCACCGGC ATCGCCCAGA CGCCGGTCGC GGGCCGGATC
CTCGCAAGCC TCGTGCTCGG GCAGGACGAC CGCTGGAGCC GGAGCGGCCT CGTGGGTCTT
GCGCGCCGCC AGACGCTGCC GCCGGAGCCG GTGCGCACGC TGGGCGCGCG CCTCGTGCGC
CGCGCCATCC GCATCCGCAA CGACCTCGAG ATCGAGAACC GGAGCCCGGG CCCGCTGGTG
CGCTGGCTCT CGTCGCTCAC GCCCGGCCGG TGA
 
Protein sequence
MASYRLALPA AAPEGDRSFW LRDLGAGPAT PPFAGEAACD VAIVGGGYTG LWTALRLKEQ 
APELRVTILE ADFCGSGASG RNGGQVHSWF AELDLLTRLV GAEEALALCH ATAEAIEELA
ELQASGTIDM DLRLDGWLWT ASARAQEGAW EPAADLCRKA GEADRLRPVG AEEIRRRTGS
GASYMGVVEP RAGTVQPAKL ALGLRALALS RGVAIHERSP VSEIVSGRPC RLQTPGGTLQ
AGKVVIASNA WAAALPELSR YLYVVDSQIV ATEPVAETLD RLGWTGGESI CDAQAHVLYY
QRTRGGRVVF GRGSGNVAYG NRFGAAFNRR PDGGADNLRE LSRVYPELRG VKIAADWSGP
IDCSAAHLPV FGSLTGEPDI LFGVGFNGTG IAQTPVAGRI LASLVLGQDD RWSRSGLVGL
ARRQTLPPEP VRTLGARLVR RAIRIRNDLE IENRSPGPLV RWLSSLTPGR