Gene RSP_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3944 
SymbolfrlC 
ID3712059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_007488 
Strand
Start bp107672 
End bp108529 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content73% 
IMG OID640069394 
ProductAP endonuclease 
Protein accessionYP_345261 
Protein GI77404687 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0718494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCC GTCTCTCCGC CCGCCAGTCG ATCGGCGCGA ACTTCGCCTT CCAGCACTTC 
CCGCTGGCCG AGGTGGCGCG CCGGATGCGC GGCTTCGGCT TCACCGAGAT CGAGCTCTGG
GGCGTGGCGC CGCATCTCGA CCTCTTCCAC TCGACCGACC GCGACGTGGC GGAGGTGAAA
TGCGTGCTGT CGGGCGAGGG CCTGTCGGTG CGCTGCCTCA CGCCCGAGCA GGTGGTCTAT
CCGATCAACA TCGCCTCGGG CGACGATGCC TTCCGCGCGG CCAGCATCGA CCGCTTCCGC
CGCGCGGCCG ACATCGCGGC CGAGCTGGGC GCGCGGCACC TGTTCCTGAC CCCCGGCCGC
GGCTACGAGA GCGAGCCCGC CGCGCGCGCC TGGGACCGCT CGGCCGAGGC GCTGCGCCTG
ATCGCGGGCC ATGCGGCGGG CCTCGGGCTC CGCTGCCTGC TCGAGCCGCT CCAGCGGGTG
GAGAGCAACA TCGCCCACAG CGCCGCCGAT ACGGCGCGCC TGCTGGAGAT GGTGGGCGCG
GACACGGTGG ATGTGGTGCT CGACACGGTC GCCATGGCCT GCGCGGGCGA CAGCGTGGCC
GATTACGCGC GCCTCTTCGG CGACAGGCTC GCCCATGTGC ATCTCGTGGA TGGCCGCCCG
GCGGGCCATC TCGTCTGGGG CGAGGGCACG CTGCCGCTCG CCCGGATCCT CGCCGATCTC
GCGGCGGCGG GCTATCGCGG CGCGCTCTCC TTCGAGCCCT TCGGCGACGG TTCCTATGCC
CTCGATCCGG TGGCGGCCTG GACCCGCCAT CTCACGGCGC TCGCGCCGCA TCTCGATCCC
GTGGAGGCCC GCCCATGA
 
Protein sequence
MSARLSARQS IGANFAFQHF PLAEVARRMR GFGFTEIELW GVAPHLDLFH STDRDVAEVK 
CVLSGEGLSV RCLTPEQVVY PINIASGDDA FRAASIDRFR RAADIAAELG ARHLFLTPGR
GYESEPAARA WDRSAEALRL IAGHAAGLGL RCLLEPLQRV ESNIAHSAAD TARLLEMVGA
DTVDVVLDTV AMACAGDSVA DYARLFGDRL AHVHLVDGRP AGHLVWGEGT LPLARILADL
AAAGYRGALS FEPFGDGSYA LDPVAAWTRH LTALAPHLDP VEARP