Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3944 |
Symbol | frlC |
ID | 3712059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_007488 |
Strand | - |
Start bp | 107672 |
End bp | 108529 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640069394 |
Product | AP endonuclease |
Protein accession | YP_345261 |
Protein GI | 77404687 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0718494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCC GTCTCTCCGC CCGCCAGTCG ATCGGCGCGA ACTTCGCCTT CCAGCACTTC CCGCTGGCCG AGGTGGCGCG CCGGATGCGC GGCTTCGGCT TCACCGAGAT CGAGCTCTGG GGCGTGGCGC CGCATCTCGA CCTCTTCCAC TCGACCGACC GCGACGTGGC GGAGGTGAAA TGCGTGCTGT CGGGCGAGGG CCTGTCGGTG CGCTGCCTCA CGCCCGAGCA GGTGGTCTAT CCGATCAACA TCGCCTCGGG CGACGATGCC TTCCGCGCGG CCAGCATCGA CCGCTTCCGC CGCGCGGCCG ACATCGCGGC CGAGCTGGGC GCGCGGCACC TGTTCCTGAC CCCCGGCCGC GGCTACGAGA GCGAGCCCGC CGCGCGCGCC TGGGACCGCT CGGCCGAGGC GCTGCGCCTG ATCGCGGGCC ATGCGGCGGG CCTCGGGCTC CGCTGCCTGC TCGAGCCGCT CCAGCGGGTG GAGAGCAACA TCGCCCACAG CGCCGCCGAT ACGGCGCGCC TGCTGGAGAT GGTGGGCGCG GACACGGTGG ATGTGGTGCT CGACACGGTC GCCATGGCCT GCGCGGGCGA CAGCGTGGCC GATTACGCGC GCCTCTTCGG CGACAGGCTC GCCCATGTGC ATCTCGTGGA TGGCCGCCCG GCGGGCCATC TCGTCTGGGG CGAGGGCACG CTGCCGCTCG CCCGGATCCT CGCCGATCTC GCGGCGGCGG GCTATCGCGG CGCGCTCTCC TTCGAGCCCT TCGGCGACGG TTCCTATGCC CTCGATCCGG TGGCGGCCTG GACCCGCCAT CTCACGGCGC TCGCGCCGCA TCTCGATCCC GTGGAGGCCC GCCCATGA
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Protein sequence | MSARLSARQS IGANFAFQHF PLAEVARRMR GFGFTEIELW GVAPHLDLFH STDRDVAEVK CVLSGEGLSV RCLTPEQVVY PINIASGDDA FRAASIDRFR RAADIAAELG ARHLFLTPGR GYESEPAARA WDRSAEALRL IAGHAAGLGL RCLLEPLQRV ESNIAHSAAD TARLLEMVGA DTVDVVLDTV AMACAGDSVA DYARLFGDRL AHVHLVDGRP AGHLVWGEGT LPLARILADL AAAGYRGALS FEPFGDGSYA LDPVAAWTRH LTALAPHLDP VEARP
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