| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_3067 |
|---|
| Symbol | |
|---|
| ID | 3704483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 3456442 |
|---|
| End bp | 3457257 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637739541 |
|---|
| Product | transfer origin protein, TraL |
|---|
| Protein accession | YP_345038 |
|---|
| Protein GI | 77166513 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAG CGCATTTTAC TCTGCAAGGG AAAGGCGGTG TAGGCAAAAG CTTGGTCTCC
GCTCTGATCG CCCAGCATCG CCAAGAAAAT AACATTCCCT TGATCTGTGT GGACACCGAT
CCGGTGAATG CCACCTTTTC CGGTTATACA GCTTTTCCAG TCAAGCGAAT AGAATTATTA
AAGGAGAATA CTATCGATGA GCGGGAATTT GACCGGCTTA TGGAGCTTAT CGTAGACAAC
CGGGATACGG AAATAGTAAT TGATAATGGG GCATCTAGTT TTATTCCTTT ATCCTCCTAT
TTGGTGGAGA ATGAAGCAAT AGATATGCTT CATTCCTTGG GGCATTCAAT TATTATTCAT
CCGGTAGTGA CGGGTGGTCA GTCGCTGCTC GATACTCTCT CAGGTTTTGA TGCCTTAGCC
AGCCAATTCC CAGCGTCGGC AGACATGGTA GTATGGCTAA ATTACTACTT TGGCCCAATT
GAAAAAGAGG GCAAAACCTT CGAGGAAATG AAGGTTTATC AGGATCACAA AGGGCGCGTA
AAGGGGGTTG TGAGGATTGA TCGCCATAAT CAAGCTACCT TTGGAGAAGA TATGCAGCAA
ATGCTCGAAA ATCGGATGAC GTTTAGCCAG GCGATTGAAT CCGAAAAATT CAAACTTATG
GCTAAGCAAC GCCTCAGAAA GATGAAAGAT GAACTATTTA AACAAATGGA TCAGATACTA
GCAGTATCAG AAAAACCCGT GGCCAAAAAA CACTCGGCTG CCGAAGCGAA AAAGCCGAAA
AAAGTGAGCA GAACCTCTAG CAAGCGATCC GAGTAA
|
|---|
| Protein sequence | MARAHFTLQG KGGVGKSLVS ALIAQHRQEN NIPLICVDTD PVNATFSGYT AFPVKRIELL
KENTIDEREF DRLMELIVDN RDTEIVIDNG ASSFIPLSSY LVENEAIDML HSLGHSIIIH
PVVTGGQSLL DTLSGFDALA SQFPASADMV VWLNYYFGPI EKEGKTFEEM KVYQDHKGRV
KGVVRIDRHN QATFGEDMQQ MLENRMTFSQ AIESEKFKLM AKQRLRKMKD ELFKQMDQIL
AVSEKPVAKK HSAAEAKKPK KVSRTSSKRS E
|
|---|
| |