Gene Noc_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_3057 
Symbol 
ID3704473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp3449192 
End bp3449539 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID637739531 
Producthistidine triad (HIT) protein 
Protein accessionYP_345028 
Protein GI77166503 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.750318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATAG ATCAAACAGA TTGCATCTTT TGCAAAATTA TAGAGGGCGA GCTGCCAGCA 
AAGGTGGTTT ATGAAGATGA CCAGGTGATT GCTTTTGAAG ACATTCACCC TAAGGCAAAG
ATTCATTTGC TGCTAGTGCC CCGCAGTCAT ATTTCCAGCC TAGAACAACT AGAAGTCAAA
CATGAGGCGC TGATTAGTCA TCTATTGCTA CTACTACCCG ATCTGGCTCG CCGACAGGGC
CTCCAGGACG GTTTCCGGAC TATAATCAAT ACTGGACGGG GAGGCGGTCA AGAAGTGGAT
CATCTCCATA TCCATTTGTT GGGTGGCAGC CAGCTACCAG GTTTTTAG
 
Protein sequence
MAIDQTDCIF CKIIEGELPA KVVYEDDQVI AFEDIHPKAK IHLLLVPRSH ISSLEQLEVK 
HEALISHLLL LLPDLARRQG LQDGFRTIIN TGRGGGQEVD HLHIHLLGGS QLPGF