| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2961 |
|---|
| Symbol | |
|---|
| ID | 3707343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3347946 |
|---|
| End bp | 3348479 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637739435 |
|---|
| Product | membrane protein-like |
|---|
| Protein accession | YP_344933 |
|---|
| Protein GI | 77166408 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2323] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCACC TGATAGGAGA AAGCGGGGAA CTAGGCTGGG TGTCCCTAAA AGCGCTTTTG
CTTTATCTGA CTGCTGTCAT CGGCTTTCGG CTTGGCGAAC GCCGTACCCT CATTGAAATG
TCGCCCTTTG ATTTCGTCGC CGCCGTTGCC GTTGGCGCTA TTGTTGGGCG CGTACCGAAT
GCCAGCACTA CCAGCTACCT GGCCGGCGCA GTTACCTTGG TTACCTTGCT CCTTGCCCAC
CGGATTATCA CCCAGTTGCG CTACTTTCCC AGCATTGCCG ATCTGGTGGA CCCTCCGCCA
CGGGTGCTTA TTGCCCATGG GCAGGTACTC AAAGGTGAGC TGCGGCAATG CGGATTGACG
CTCAACGACT TGCATGGGCT GCTCCGCCAG CGCGGCGTTG AGGATCTAAG GGAGGTTCAA
TTTGTGATCT GCGAGCAGCG GGGACAGATT TCCATTATCC GCCAAAAAGA CCGGACCGAT
ACCGATTCCA GTCTAATACG GGACATCGTA GCGCGAATAT CCTCGCCGCC ATAA
|
|---|
| Protein sequence | MDHLIGESGE LGWVSLKALL LYLTAVIGFR LGERRTLIEM SPFDFVAAVA VGAIVGRVPN
ASTTSYLAGA VTLVTLLLAH RIITQLRYFP SIADLVDPPP RVLIAHGQVL KGELRQCGLT
LNDLHGLLRQ RGVEDLREVQ FVICEQRGQI SIIRQKDRTD TDSSLIRDIV ARISSPP
|
|---|
| |