| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2943 |
|---|
| Symbol | |
|---|
| ID | 3706425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3330777 |
|---|
| End bp | 3331817 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637739420 |
|---|
| Product | choloylglycine hydrolase |
|---|
| Protein accession | YP_344918 |
|---|
| Protein GI | 77166393 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3049] Penicillin V acylase and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAC AGATGATTTA CCGAACCGTG GCAAGTGCAG CTATTTTCGT GGTTGTGGGA
CTTGTTTTCT TGCAGGCCGC CGATGCCTGT ACGCGTGTTC TTTGGAACGA CAGCGGGCTG
AACGTCGTGG TGGGGAGGAC GATGGACTGG CCGGAGTCTA CCCAGCCGGA GATCGTGGTC
TTTCCACGTG GAATGAAACG GGATGGGGGC CTCCTCGGTA CGGAGACTGC GGTCAAGGTG
AATCCAGCCA AGTGGACATC CAAATATGCC AGTATGGTGG TCCCAGTTTA CGGCATTGGC
ACCGCTGACG GCTTTAATGA AGCCGGGCTA GCAATTCACA TGCTGTACCT CGAAAATACG
GATTTTGGGC CACGCGATCC CAGCAAGCCG GGTGTACAGG CTGGTCTATG GGGGCAGTAT
GCACTGGACA ATGGGGCGAC AGTTGATCAA GCATTGCCCC TGCTCAAGAA GATCCAGCCG
GTGATGGTCG AGATGCACGG ACACAAGGCC ACGGTTCACC TGGCCTTGGA AGATGCCACG
GGTGATTCTG CTATCCTCGA GTACATTAAC GGCAAGCTGG TCATTCATCA TGGCCGTCAA
TATCGGGTCA TGACCAACGA TCCAAGCTAT GATCAGCAAC TCGCGTTGCT GCAGAAGATG
AAAAAAGAGG TTGATTTCAC GCATCCAAGC AGTAACACCC CGTTACCCGG CAATGTCAGT
GCTACGGATC GTTTCCAGCG GGCGTCTTAT TTCTCGGCAT TGTTACCCAA GCCGAAGGAC
GAACGCGAGG AAGTCGCTTC TATACTGTCC ATTATGCGCA ACGTATCGGT GCCATTTGGT
GCACCCTACC AGAGCTTTGG TATCTACAAT ACTGAGTACC GTACGGTGAC CGATCTCGAC
ACTAAGCGCT ACTATTTTGA ATTGACGACT GCACCGAATG TGATCTGGGC AGATCTTACG
AAATTTGACC TGAAACCCAG GTGCACCGGT AATGGTGCTA AATCCGGACA ATATCGGCCT
GAGTGGGAAT GTCACGGATA G
|
|---|
| Protein sequence | MNRQMIYRTV ASAAIFVVVG LVFLQAADAC TRVLWNDSGL NVVVGRTMDW PESTQPEIVV
FPRGMKRDGG LLGTETAVKV NPAKWTSKYA SMVVPVYGIG TADGFNEAGL AIHMLYLENT
DFGPRDPSKP GVQAGLWGQY ALDNGATVDQ ALPLLKKIQP VMVEMHGHKA TVHLALEDAT
GDSAILEYIN GKLVIHHGRQ YRVMTNDPSY DQQLALLQKM KKEVDFTHPS SNTPLPGNVS
ATDRFQRASY FSALLPKPKD EREEVASILS IMRNVSVPFG APYQSFGIYN TEYRTVTDLD
TKRYYFELTT APNVIWADLT KFDLKPRCTG NGAKSGQYRP EWECHG
|
|---|
| |