| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2913 |
|---|
| Symbol | |
|---|
| ID | 3707430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3294953 |
|---|
| End bp | 3295891 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637739390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_344889 |
|---|
| Protein GI | 77166364 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.410648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTT GGAAGTTACG CCAGGTACCT TTCAAATATC AGCTCAGTGA CCGGACATTG
TGGAGCGCTT CATTGCCGCT CCAATGCCGA TCGGTCGATC TGTTTGATGA ATCGTTGCCG
CAGTTGCCAC TGGAACCGCC CGCTGACGAA CTTGTGGAGG GAAGCCAGGG ATTCAGCGTC
CGTGCGCTAC CGGTAGGCAC TGAACTTCCC AGAATCAGCA GACATGGCAG CTACCTCTGT
TACGTGCCGT TGAATTATCA GCATTACTAT ATTGATTTGT CCCTGACCTA TGACGACTAT
CAGAAGACGT TTTCTTCGAA AACGCGTTCC ACGATTAATC GCAAAGTGAA GAAATACGCC
AAACATTGCG GCGGCAACAT CCGCTGGAAA ACCTATAAAG CACCTGGGGA AATCGGTGAT
TTTTTCCGCC AAGCACGGCG AGTGTCAAAG TTGACGTATC AGGAACGGCT TCTCGATGCG
GGGATCCCTG GGTCCGATGC CTTCATCCAG CAGGCGGAAG CACTGGCGGG CGAAGACCGC
TTGCGGGCCT ATATCCTATT CGACGGCGAG CGGCCCGTAT CGTACCTGTA TTGCCCCGCT
CGTAACGATG TGCTCATCTA TGCCTATCTC GGCTATGATC CTGACTACAT GAAGCTGTCG
GTCGGCACAG TACTTCAATG GCTAGCTCTG CAAGAGCTTT TCGGCGAGGG TCGATTTAAA
ATTTTTGATT TCACTGAAGG CCAGTCGGAT CATAAGCGCC TCTTTGCCAC GCACCAAAAA
AATTGCGCCA ATGTATTCTT TGTCAAGAAT TCGATTCGCA ACGGAGCTAT CATCTACAGC
CACAATTTTT CGTCTTGCGT ATCAGGTTGG CTGGGTTCCA GGCTCGACCA GCTAGGCCTG
AAAGCAAGAA TCAAACGTCT ACTGCGATTC GCGGGATAA
|
|---|
| Protein sequence | MKGWKLRQVP FKYQLSDRTL WSASLPLQCR SVDLFDESLP QLPLEPPADE LVEGSQGFSV
RALPVGTELP RISRHGSYLC YVPLNYQHYY IDLSLTYDDY QKTFSSKTRS TINRKVKKYA
KHCGGNIRWK TYKAPGEIGD FFRQARRVSK LTYQERLLDA GIPGSDAFIQ QAEALAGEDR
LRAYILFDGE RPVSYLYCPA RNDVLIYAYL GYDPDYMKLS VGTVLQWLAL QELFGEGRFK
IFDFTEGQSD HKRLFATHQK NCANVFFVKN SIRNGAIIYS HNFSSCVSGW LGSRLDQLGL
KARIKRLLRF AG
|
|---|
| |