| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2872 |
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| Symbol | |
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| ID | 3705585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3252750 |
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| End bp | 3254780 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637739348 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_344848 |
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| Protein GI | 77166323 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCGCTT TTTTTTTGAG TAAAGCGATT TATGCCCATC CCGTAGAGTC TGAGCCGCTA
ACAGCCGAAT TAGATAAAAT CAATGTTACC GAGTATGCCA AAGATTTAAC TGGGCCTACT
GCTTCGGTTT CCCAAGGCCG CGTCAGCTAT GTTCAACTCG AAAAGCGGCC CCTGTTAAGG
ATTGGCGAGT TGCTAGAAGT CGTGCCGGGA ATGATTGCAA CCCAGCACAG CGGGCCGGGT
AAAGCCAATC AATATTTTCT GCGAGGATTC AACCTGGATC ACGGTACCGA TTTTTCAGCC
AGCATTGATG GAATTCCGCT GAATTTGCCT ACCCATGCCC ATGGACAGGG CTATCTTGAT
TTAAATAGTC TTATTCCTGA GATGGTTGAG AGTATTGCCT TTCAAAAAGG CCCTTACTAT
GCGGATGTTG GAGATTTTTC TTCGGCGGGA AACGCCCGCA TCCAAACCTT TAATCGGCTG
TCTCAGGGGA TTGCGAAGTT GGCCGTTGGA GAGGACGATT TTTATCGTGG TTTATTGGCT
GATTCCAGCC AATTGGGAAA GGGTGATCTG GTTTATGCGG GTGAATTTAA TTTTTATAAT
GGACCTTGGG TGCATTCCAA TGATAGCAAG CAGTATAAGG GGCTTATTAA GTATACGGTG
GGTGATAGCG CCCAAGGTCT AACCTTATTG GGCTCAGCTT ATCATGGGCG TTGGAAGGCG
ACGGATCAAA TCCCGCAACG CGCTGTGGAG CAAGGGCTTA TCTCCCGTCT AGGCACGATT
GATCCCACGG ATGGGGGGGA AAGCAGCCGG TATAGTTTGG GTGTGAACTG GCGACATCAC
CGGGCTAATA GCAGCACTCA TATCACAGCC TATGGATTTT ACTACGATCT CGATCTCTAC
TCGAATTTTA CCTTTTTTCT TGAGGATCCC CTTAATGGTG ATCAGATACA TCAAAAAGAT
CGGCGCTGGG TGGTGGGCAC CGAAGCCGAG CATACCTGGT TTTTGGCCTG GGGCGAGCGA
GAGGTTGCTA ATACCATTGG TTTGCAGTTT CGCCATGATG CGATTGGTGA GGTGGGGCTT
TTTCACACCC GGGCTCGTAA GAGCCTAAGT ACTGTCCGCA GCGACCAGGT CTATCAAAGC
AGAGTAGGTT GGTATGGAGA AAGCGAAATA AAATGGAATG ATAAATTTCG TTCCGTTGTA
GGATTGCGGG GCGATTTTTA CAATTTTGAT GTGAATAGTA GGCTGCCTGA AAATACCGGC
GATCGAACGG ATTTTATCGC CAGCCCGAAA CTGAGCTTTA TCTTAGGACC TTGGGCTAAA
ACGGAATATT TTATTAATGC AGGCTATGGT TTTCATAGCA ATGATGCCCG CGGCGTTACG
GCAACGGTGG ATCCTGAAAC AGGCATGCCG CTTAAGCAAG TCAATCCTTT GGTCAGATCC
CAAGGGGCAG AAGGGGGTCT TAAGAACCAG GGGATCCCGG GGCTTACAAC GACATTGGCC
GTATGGTACC TTGCTTTAGA TTCTGAGTTG GTTTTTGTGG GTGATGCGGG CACGACTGAA
CCCTCCGGTA GCAGTAATCG CTACGGCGTG GAATGGACTA ATTCCTATCA GTTGATCTCC
TGGCTCACGT TGGAGGCGGA CTTTGCGTTT TCAAAAGCAA AATTTGCTGG AGGAGGGGAA
GTGCCCAATT CTTTGGGACG GGTGATTAGT GCAGGCGTTA CCATGGATTG GCCGGCCAAT
ACCCGTTTTT TTGGCGCACT GCGTCTTCGC CATTATGGCG ATTCTCCTTT AACCGAGGGG
GGGAACGTAA AAGCGCGCAG TACTACAGTG CTCAACTTAA AAGCAGGGTA CAACGCTAAG
CAATGGGAAA TAGCGCTTGA CGTTTTGAAT CTTCTGAACT CGGAAGATCC GGATATTGCT
TATTTTTATG ATTCTCGCCT GCCGGGAGAG CCATCAAGCG GCGTTCCGGA TATTCTTTTT
CATCCTGTCA TTCCGCGTAG TATTCGCGGC AGCGTAGTGG TCCGTTTTTG A
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| Protein sequence | MRAFFLSKAI YAHPVESEPL TAELDKINVT EYAKDLTGPT ASVSQGRVSY VQLEKRPLLR
IGELLEVVPG MIATQHSGPG KANQYFLRGF NLDHGTDFSA SIDGIPLNLP THAHGQGYLD
LNSLIPEMVE SIAFQKGPYY ADVGDFSSAG NARIQTFNRL SQGIAKLAVG EDDFYRGLLA
DSSQLGKGDL VYAGEFNFYN GPWVHSNDSK QYKGLIKYTV GDSAQGLTLL GSAYHGRWKA
TDQIPQRAVE QGLISRLGTI DPTDGGESSR YSLGVNWRHH RANSSTHITA YGFYYDLDLY
SNFTFFLEDP LNGDQIHQKD RRWVVGTEAE HTWFLAWGER EVANTIGLQF RHDAIGEVGL
FHTRARKSLS TVRSDQVYQS RVGWYGESEI KWNDKFRSVV GLRGDFYNFD VNSRLPENTG
DRTDFIASPK LSFILGPWAK TEYFINAGYG FHSNDARGVT ATVDPETGMP LKQVNPLVRS
QGAEGGLKNQ GIPGLTTTLA VWYLALDSEL VFVGDAGTTE PSGSSNRYGV EWTNSYQLIS
WLTLEADFAF SKAKFAGGGE VPNSLGRVIS AGVTMDWPAN TRFFGALRLR HYGDSPLTEG
GNVKARSTTV LNLKAGYNAK QWEIALDVLN LLNSEDPDIA YFYDSRLPGE PSSGVPDILF
HPVIPRSIRG SVVVRF
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