| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2765 |
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| Symbol | |
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| ID | 3705303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3135929 |
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| End bp | 3138184 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637739241 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_344742 |
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| Protein GI | 77166217 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCGA CCTCTCGATA CGGCCCGCAC CCCAACCGGC CCGCGGCGAA CAAGCAGTTT
ACCAATCGGG ATGGGCCGAT TAAAGCCTTT CAAGCGGCCC GCCAGGCCCT CGCACCCGAC
CAGCATGATG TGCTGACGTT CCATGGCGTT GGCGGGCAGG GCAAAACAGC CCTGGGGAAG
AAATTTAGGC AAATCCTGGA GGAAGAGACG CCCCGTGCCG CGCTTTGGGG CCACGTGGAT
TTAGCGGACA CGCACCTGCC TACGCCCGAC CGGATTCTTC TCGAATTACG CCGCTCGCTC
CGGCGCTCGG GAAAAATAGA GTTTCCCGCT TTCGATGTCG CCTTTGCCCA TTACTGGCAG
CAAGCTTACC CGCATTTAAA ATTTCAGGAC ACCCATCGGG ATTTGCTCAC CGATAAGGAA
GGGGTTTTTG CCCACGCTCT GGAGTCGGCG AGTAGCTACG CGGAAGCCTT ACCGGCGGGC
ATTGGCCTTA CCATGATAGC GCTGAATTGG GTGCGCCAAC GAATGCGCGA TTTTGATAAC
CGCTATCGTC CCGCCCTCAG GGGTTTGGAA ACCTTCAGCC CCACGGAGAT TCTCGACCGC
CTTCCTTATT ACCTCGGCCT CGATTTATGC GGCTATCAGC GCCGGCAAAG GGCAAAACAG
CTCATTGTTT TTTTAGATAC CTATGACGCC TTATGGGAAA CCTTCACCCA GGGCGCCCGC
TGGGAGGTGG ATGCCTGGGC GCGGGAGCTG GTCGCGAGCG CCCCCGGCGT GCTGTTTGTG
GTCTTCGCAA GAGAGAAACT CACCTGGGAT ACCCATGAAC CCGATGCGTG GCGGGGATGT
CTTCACCATC AGCCCCCCCT TGCGCCGCTT ACTGATGAGG ATGCCGACAC GTTTTTGCGC
CAAATTCCGA TAGAAGAGGA GGCCGTGCGC CAGACCATTA TCCAAGCGGC CGAGGGCCAT
CCGTTTTATC TCGACCTGGA AGTGGAGCAC TATCTCGATT TAGTGGCTGA CGGCGCAACA
CCTCAACCGG AGCACTTTGG CCAGACAAAG CAAGCGATTC TGGCGCGATT TTTACGCTAT
CGGGCAGGCG AAGAACAAGC CACCCTCAAG GTGTTATCGG TGGTCCGCTC CTTTGACTTT
GAGCTATTGG AAGCGCTCGT CCGAGCGTTC CAGACGGGCT TTCCTCCCAC TGAATTCTTT
AATTTTGTAC GCTACTCTTT TGTAGCGCCA GAAAGCGGCG AGCGGTATCG CTTGCATTCG
CTGATGCAAG CGCATCTTCT GGAGAGCTTG GAGCCAGCGC TTCAAAAAAA GATCCATGAC
TTTGCGTTTA CCTATTATGA CGCGCGATGC CAACCCGAAT CCCCCAAAGA CCTTCAGCCA
GCCCATGAAA TCGCGTTAGT CGAAGCTTTT TACCACCGGG ATATGACCGA TCCCCAGGAG
GCGGCCGCAT GGATTAACCA ACGGACAACT GTCTTTTACG AAGCGGCCCG GTATTCGTTA
GTCGAACCCC TCTACCAACG GGCCTTGGCT ATTCGTGAAC AGATCCTCGG CCCCGACCAT
CCCGATACTG CCACCAGCCT CAATAACCTG GCGGAATTGT ATCGCGCCCA GGGGCGCTAT
GCCGAGGCCG AGCCCCTCTA TCAACGGGCC TTGGCTATTT GTGAACAGGT CCTCGGCCCC
GACCATCCCG ACACTGCTCG AAGCCTCAAT AACCTGGCGG GGCTGTACAA GGCCCAGGGA
GACTATGGGC AGGCCGAGCC CCTCTACCGG CGGGCCTTGG CTATTTGTGA ACAGGCCCTC
GGCCCCGACC ATCCCCACAC TGCCACCAGC CTCAATAACC TGGCGGGGCT GTACGATAGT
CAGGGACACT ATGGGCAGGC CAAGCCCCTC TATCAACGGG CCTTGGCTAT TTATGAAAAA
ACCCTCGGTC CCGACCATCC CCGCACCGCC ACCAGCCTCA ATAACCTGGC GGCGCTGTAC
GATACGCAGG GAGATTATGC GCGGATCGAG CCCCTCTATC AACGGGCCTT GGTTATTCAT
GAAAAAACCT GCGGTCCCGA CCATCCCCGC ACCGCCACCA GCCTCAATAA TCTCGCGGGG
CTGTATAAGG ATCAGGGAAG CTATGCCCAG GCCGAGCCCT TTTATCAACG GGCCTTGAGT
ATTTGTGAAA AAAACCTCGG CCCCGACCAT CCCGATACCC ATACGGTGCG TCAAAATTAT
CAAGCGCTGC TTGCCGCCAT GGGGCAGCAG AAATAG
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| Protein sequence | MPPTSRYGPH PNRPAANKQF TNRDGPIKAF QAARQALAPD QHDVLTFHGV GGQGKTALGK
KFRQILEEET PRAALWGHVD LADTHLPTPD RILLELRRSL RRSGKIEFPA FDVAFAHYWQ
QAYPHLKFQD THRDLLTDKE GVFAHALESA SSYAEALPAG IGLTMIALNW VRQRMRDFDN
RYRPALRGLE TFSPTEILDR LPYYLGLDLC GYQRRQRAKQ LIVFLDTYDA LWETFTQGAR
WEVDAWAREL VASAPGVLFV VFAREKLTWD THEPDAWRGC LHHQPPLAPL TDEDADTFLR
QIPIEEEAVR QTIIQAAEGH PFYLDLEVEH YLDLVADGAT PQPEHFGQTK QAILARFLRY
RAGEEQATLK VLSVVRSFDF ELLEALVRAF QTGFPPTEFF NFVRYSFVAP ESGERYRLHS
LMQAHLLESL EPALQKKIHD FAFTYYDARC QPESPKDLQP AHEIALVEAF YHRDMTDPQE
AAAWINQRTT VFYEAARYSL VEPLYQRALA IREQILGPDH PDTATSLNNL AELYRAQGRY
AEAEPLYQRA LAICEQVLGP DHPDTARSLN NLAGLYKAQG DYGQAEPLYR RALAICEQAL
GPDHPHTATS LNNLAGLYDS QGHYGQAKPL YQRALAIYEK TLGPDHPRTA TSLNNLAALY
DTQGDYARIE PLYQRALVIH EKTCGPDHPR TATSLNNLAG LYKDQGSYAQ AEPFYQRALS
ICEKNLGPDH PDTHTVRQNY QALLAAMGQQ K
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