| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2750 |
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| Symbol | |
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| ID | 3705386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 3119234 |
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| End bp | 3122734 |
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| Gene Length | 3501 bp |
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| Protein Length | 1166 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637739228 |
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| Product | helicases-like |
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| Protein accession | YP_344729 |
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| Protein GI | 77166204 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR02562] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0177005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTATTT TATTCGTCAG CGAATGCGAA AAAGCTGCCT GGAAACGCTC GCGCCGCATT
CTATCTCGCT ATGCGGTGCA AATCGGGCGG CGCACTTGGC TAGCACGGAT TAGCGCGGAA
GGTTTGCAAA ACATACGCCG GGAATTAACT CAAGCGGCCA GCCGGCATAC TTCGGTTGCC
TGTCATCGCG TCAAGGGGCG CTACCAAACG GAGTTGGCCT GGGTGGTGGG CAGCCGCCGG
CATTTTAGCC GGAATGGTGA GTTTGCCTTC AGCCATAGCG CAACTCCTTT GCCAAGCGTT
AACGAAGAGG CCGCGCCCGC CGTGCGGCTA CTTAATCATC TTTGTATATT GGCCGGGCTT
TTTCATGATC TGGGGAAACA TGGCGCTTGC TTTCAGCGCA AACTACGGGA TGAAAACAGC
AACCAAAGCG ATCCCGTGCG CCACGAGAGA ATATCGCTTT TGCTGCTGTT GCGGCTTATC
ATTTTAACTG CGCTACCTGC CGCCGAGGAT AACCCACCAC CGGTCGAGCC TACCCCCAAA
AGACGCCGGC GCCGGGTTGC CGGCGCTAAT CATAACCTCT CCAAACCTGC CCTTGGTTTG
GCCAGTCTTA AAGACGAGCA ATGGCTCGCG GCGCTTACCG ACTCCAAAAA AATTTATGAA
GCCCTGCATC GGATATGGAA GGAAACGTCC CATGATCACT GGCGGGAACT CATACCCATT
GAAGGGAGCA CGTTACGCCC ACAATGGAGT TCGGCAGAAG GTGATCGGGG TTTAGCGCCT
TTGCTAAGCG TGCTCTGTTT TTTGATCATA TCTCATCATA AATTACCGGA CGGACATGAA
GATAGCTTTG CGCCGCTGGA GGAAACCTAC CTTAACAGAT CTCAGGAATT GCAGGATGGG
CTACGGCTAG CCACGGATTA TCGTCCCGCC TGGTCACAGT CGCCAAGATG GGTCAATGAG
ATTACCAAAC ATGCCCGGCG TGCCCGTTAC CTCTTACAGG AACACGCGCT TCCTATCCGG
GATCGCGTGC TTTGGTATAG CGCTGCCCGC TATATGGCTC GCTGCGCCCT CGTTTTGGCG
GATCACAGCA TTTCCAGCCA GGCGAAAAGG GAACTCCCCG TCCCATCCCA ATCAGCCCAG
GCGCAGGTTT GTTTCGCCAA CAGCCAACAA GGGCAATTAC GACAAACGCT GGCCGCCCAT
TTGGAACGAG TCGGCAAACT TTCGGGAAAA GCCTTCAACC AGCTGCATCA ACTTCAGCAT
AATCGTAAAG CCAGCACCAT TGAAACCTCT CCCCCCGCCC TGACCGTTCC AATTAAAGAA
GAAGCCTTTA GCTGGCAGCA AAAAGCCGAA CGCAAAGTGC TCCAAATCCA ACGGCAAGAA
GATAACGCCA AGGAAGGCTT TTTCGCGCTC GTGATGGCCG AAACCGGCTC TGGCAAAACG
CGGGGTAACG CCCGCATTCT GGCTGCCGCT AACCGCCATC AAAATTATCG GTTAACAGTT
GCTTTGGGAC TGCGCACCTT GACCTTGCAA ACTGGCGATG AATACCGTGA TGATTTGGGG
TTTGGCAAGA TGCCTGATGC CGTAGGGGAT CAATGCGCGA TCATGGTGGG TGGCGCTTTA
ACGACCGCCC TTCATGAGAT GGCGAATGCT GGGGAAGAGG CAGGCGCCGA AAAAGGAAAC
CACCTGTTTT CCCAGGAAGA ACAGGCCGGC GTTGAAAGCA GCGCCCTGGA CGACTCCCTG
TATGAAGGAA TCACCGGCGA ATTTGATTTC GATTACGATC CTGACGCCCC CTGGCCGGAA
GATATAATCG CGCCCAATAA TCCCAAACTT AATCACCTGT TACAAGTTCC TGTTCTGGTC
TGCACTATCG ATCACTTGAT GCCGTTTCTG CAAAGCCAGC GGGCATCAGC GGCCGTCCTG
GGTTTTCGCA TGGCGGGATC AGACTTGATT ATTGACGAAA TCGACAGCTT TTCCGCCGAG
GATTTGCCCG CATTATTAAA ACTTGCCTAT GTGGTGGGTT TCAACGGGCG GAAATTGCTG
CTTTCTTCCG CTACCTTGCC ACCGGCCACC GCACGCGCTT TCTACCGCGC CTACCAAACC
GGCTTTAATC GTTGGCGGCA ACTTCAAGGC ATGGAATCGG GTCCTATCCG CTGCGGTTGG
TTCAGCCATC ATGCCGCCCA TATCAAATTA GCCTCTGTCG CTGATCATGC TGCTTTTACC
AAGCAACATG ATCGATTTAT CCAGGCCCTG TTGAATACGC TACAGCAACA ACCCGCGCGG
CGGCGGTTGG ATACCGTTCT CATACCCATT GCTGAAGGAC CGGCAGCAGT TTATCAAAAC
ATAATGGAGA GTTGCAGGGA ATTGCATCAA CAGTGGGCGA GCCACGATCC GGAAAGCGGC
GTTCGCTATT CCATCGGCTG CGTTCGCTGG AGCAATGTTG CCCATACCTG CGGATTTGCT
AAGCACTGGC TTAATATGCC TGCTAATTTA GATGATATTC AGGTAAAGCT GATTTGCTAC
CATGCCAAAC ATTTACCGCT CATCCGCCAT CACATTGAAC AAACATTAAA TACTCTTTTG
AAGCGTAAAG AAGGGCGGCA AGCGCATGAT CATCCAACTT TGCGCGCCCA TTTAGAAAAT
TGTCGGCAAC AGGGAAAAAC TCACTTACTG GTTATTGTGA GCACCTCTCC CATATCGGAA
GTGGGACGGG ATCACGACTA TGACTGGGGA ATTGTCGAAC CCAATTCTTA CTGGTCCTTG
ATTCAAATGG CCGGGCGCAT TTGGCGGCAA CGGCGACATT GGGAAGCCCG TCAACCCAAC
ATGCGGATAA TGAGCCAAAC CATGCGGGGC TTAAATAAGC AACCCATGCG CTTTACCAAA
CCCGGGCCGG AGTCTAAGCA CTTTAAACTA TCTGACAGGG CCGAGACATT AGCGCAGATA
TTTGATCTGG AGAGCTTGCA AGAAAGTATT GATGCCCGCT TTACGCTCCA AGAACCGCTG
ATTCAAGCTG AGAAAATCAA AAACCAGTAT ATTTATCCCG ATATGCGCCA GCTTGAACAT
GGTCAGTTAC AGAGACTTTT GGAAAGTACC GAGCAGTCAA AACAGGCTAT GTCTTTTATT
GAAGGCGCTC GTCCGCAAAT GGTATTGACC CAAAGACATA GTCAGTGTTG CCCTTTCCGA
AAAGATCAAA ATCCGAACTT GCTCTGGTTT GATCGGGAAG ACGACGGTGT CTGGAAATAT
CTTGATAAGA AAGAAAAAAA AGCTAAAAAC GTAAAGGATA AAGTTCATGA AAAACGCAAC
TACCCATGCC TTGCGCAATC TTATTTCTCC CCTGACGAAC TTTCCCGGGA TTCCTTACAT
GAAAAATGGC GGGAACAATT AGCCCGGAGA GGTGTGACTG ACTCCCATAC CATTAACGCG
CTGCCCCTAT CCATCGGGGA TAATTTCGAA CAAGGAAAAC AACTATATTA TAGTGATATT
ATCGGCTGGA TTTTTTCTTA A
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| Protein sequence | MIILFVSECE KAAWKRSRRI LSRYAVQIGR RTWLARISAE GLQNIRRELT QAASRHTSVA
CHRVKGRYQT ELAWVVGSRR HFSRNGEFAF SHSATPLPSV NEEAAPAVRL LNHLCILAGL
FHDLGKHGAC FQRKLRDENS NQSDPVRHER ISLLLLLRLI ILTALPAAED NPPPVEPTPK
RRRRRVAGAN HNLSKPALGL ASLKDEQWLA ALTDSKKIYE ALHRIWKETS HDHWRELIPI
EGSTLRPQWS SAEGDRGLAP LLSVLCFLII SHHKLPDGHE DSFAPLEETY LNRSQELQDG
LRLATDYRPA WSQSPRWVNE ITKHARRARY LLQEHALPIR DRVLWYSAAR YMARCALVLA
DHSISSQAKR ELPVPSQSAQ AQVCFANSQQ GQLRQTLAAH LERVGKLSGK AFNQLHQLQH
NRKASTIETS PPALTVPIKE EAFSWQQKAE RKVLQIQRQE DNAKEGFFAL VMAETGSGKT
RGNARILAAA NRHQNYRLTV ALGLRTLTLQ TGDEYRDDLG FGKMPDAVGD QCAIMVGGAL
TTALHEMANA GEEAGAEKGN HLFSQEEQAG VESSALDDSL YEGITGEFDF DYDPDAPWPE
DIIAPNNPKL NHLLQVPVLV CTIDHLMPFL QSQRASAAVL GFRMAGSDLI IDEIDSFSAE
DLPALLKLAY VVGFNGRKLL LSSATLPPAT ARAFYRAYQT GFNRWRQLQG MESGPIRCGW
FSHHAAHIKL ASVADHAAFT KQHDRFIQAL LNTLQQQPAR RRLDTVLIPI AEGPAAVYQN
IMESCRELHQ QWASHDPESG VRYSIGCVRW SNVAHTCGFA KHWLNMPANL DDIQVKLICY
HAKHLPLIRH HIEQTLNTLL KRKEGRQAHD HPTLRAHLEN CRQQGKTHLL VIVSTSPISE
VGRDHDYDWG IVEPNSYWSL IQMAGRIWRQ RRHWEARQPN MRIMSQTMRG LNKQPMRFTK
PGPESKHFKL SDRAETLAQI FDLESLQESI DARFTLQEPL IQAEKIKNQY IYPDMRQLEH
GQLQRLLEST EQSKQAMSFI EGARPQMVLT QRHSQCCPFR KDQNPNLLWF DREDDGVWKY
LDKKEKKAKN VKDKVHEKRN YPCLAQSYFS PDELSRDSLH EKWREQLARR GVTDSHTINA
LPLSIGDNFE QGKQLYYSDI IGWIFS
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