| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2704 |
|---|
| Symbol | |
|---|
| ID | 3704461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 3063169 |
|---|
| End bp | 3064119 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637739186 |
|---|
| Product | metallo-beta-lactamase superfamily protein |
|---|
| Protein accession | YP_344687 |
|---|
| Protein GI | 77166162 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGAGA ATATTATTTC CTTTCCTAGC GGTATTACCG CCATTGATAC GGGTTTTGTG
CGTCCTGAAA TGGATGCTAG CCACCTCGTT CTTCGCCAGG GACGGGCTGC TTTTATAGAT
ACCGGACCCA CGCCTTCCGT ATCCCGGCTC ATGGACGCAC TGGTAACACT GAAAATTACC
CCCCAACAGA TAGATTACAT ATTACTTACT CATATCCACT TGGATCACGC TGGCGGCGCG
GGCGAGTTAG TGCGGCGGCT TCCCCACGCA CAAGTGGTGG TGCATCCACG AGGGGCATCC
CATCTTATCG ATCCCGAGAA GCTCGTTGCG GGAACGAAAG CCGTATATGG GGACAAAATA
TTCAGGCGTT TGTATGGAGA GGTAGTTCCT ATACCGGCAG ACCGTATTAT TACCATAGAG
GATGAGGCGT GGCTGGAGCT GGGTGGAAGT CGTTTGAAGT TTATTCATAC CCCGGGGCAT
GCCTTGCACC ATTATTGTAT TATTGACCGG GACAGCCGGG GCATATTTGC TGGCGATACC
TTTGGTATTT CCTACCGGGA TTTTGATACC CTGGCGGGGG AATTTATTTT TCCCGCCACC
ACGCCCGTTC ATTTTGACCC GGACGCAGCC CATGCCTCTA TCGAACGTCT CATGGGATAT
GAGCCAGAAG GGATTTACTT GACTCATTAC AGCCGGGTTA CCGATCTTAA GAGGCTTGCT
AAAGATTTAC ATCGGGATCT CGATGCTTTT GTTGCTTTGG CGAAGGATTG TGAAGGAGAG
GAAGATCGGT TAGGGGCCAT TAAGCGGAGG CTGCGCGCTT ACCTATGGAC TCGCTTGGAT
GCCCACGGCT TCCCCCAGGA TGACCGCCGG CGCGACACTC TACTGGGAAT GGATATCAGC
TTGAACGCCC AGGGATTGGT CGTTTGGCTG AATCGGCGAG GAAGCCAATA A
|
|---|
| Protein sequence | MKENIISFPS GITAIDTGFV RPEMDASHLV LRQGRAAFID TGPTPSVSRL MDALVTLKIT
PQQIDYILLT HIHLDHAGGA GELVRRLPHA QVVVHPRGAS HLIDPEKLVA GTKAVYGDKI
FRRLYGEVVP IPADRIITIE DEAWLELGGS RLKFIHTPGH ALHHYCIIDR DSRGIFAGDT
FGISYRDFDT LAGEFIFPAT TPVHFDPDAA HASIERLMGY EPEGIYLTHY SRVTDLKRLA
KDLHRDLDAF VALAKDCEGE EDRLGAIKRR LRAYLWTRLD AHGFPQDDRR RDTLLGMDIS
LNAQGLVVWL NRRGSQ
|
|---|
| |