Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_2476 |
Symbol | |
ID | 3704614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2820268 |
End bp | 2821323 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637738955 |
Product | glycosyl transferase family protein |
Protein accession | YP_344459 |
Protein GI | 77165934 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.237805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTAATTT CACCAGCTAA CTTAATTTTG ACCGCCTATT TTTATTTATT ACTGCCTGTT TTTTTTCTAG CCGCTTTAGG TTTGGTCGGT TGTTTTCGGC GTTACGCCTT GAGTAAGGGT TTGCTGGATT CTCCGAATGC GCGCTCTTCC CATCAGAGCC CCACCCCTCG GGGAGGGGGA GTAGTGTTTG TGGGGCTATG GTTGGGAGCA GCTTTACTGG TTTGGGGTAG AGGTGAAATA TCTTCTGAAG CCGCGTTTTT TTTATTGCCA GGAGCATTCC TGGTGGCAGG GATTGGCTAC GGGGATGATC TTTATGATGT GAGTCCTCTG TGGCGGATTG TTACGCACTT CATCGCTGCC TTAATTGCAG TTTATTTTTT ATTGGCGATG GATATCCGTC AATATGGTTG GGAGATATTT TTCTGGCCAG AATTAGGAGT AGTAGCGGGC ATCCTTTTTG CCATGGTTTG GTCTATTAAT CTTTTTAACT TTATGGATGG TATTGATGGA CTTGCGGGAA TGGAGGCTTG TTTTGTTTTC AGCGTTGGAG GGTGGTGGTT ATGGGAGGCA GAGGCCTATG GCTATGCTTA TCTGGCTTGG GTGTTAGTAG CTGTAGTTGC TGGTTTTCTG GTGTGGAATT GGCCCTCCGC TAGAATTTTT ATGGGAGATG GAGGAAGTGG TTTTCTAGGG TTTTTGATTG CTGCCTTTAC GTTTGCTGGG CACGTTTGGT GGGATATTCC GATTTTGCTA TGGATAATAG TCTATGGCGT GTTTTGGTTT GACGCCACAG TGACTTTACT ACGTCGGATT CTGGCTGGCG AGCGTTGGTA TAGCGCCCAT TGTTCTCATG CCTATCAGCG ATTATATCAA ATTGGATGGT CCCATCGTAA AGTGCTTTTA GCTATCAGCG GTATTAATAT GGCCTTGGTT ACTGTAGCCC TGTGGGCAGA TGCGAACCGG GAAGCCTTGC CTTGGATATT TTTAGTAACA CTGATGTTCC TTGGGATCAT CTACGGGGGC ATTGAACGCC TACGTCCCAT GTATCCAAAA GAATAA
|
Protein sequence | MLISPANLIL TAYFYLLLPV FFLAALGLVG CFRRYALSKG LLDSPNARSS HQSPTPRGGG VVFVGLWLGA ALLVWGRGEI SSEAAFFLLP GAFLVAGIGY GDDLYDVSPL WRIVTHFIAA LIAVYFLLAM DIRQYGWEIF FWPELGVVAG ILFAMVWSIN LFNFMDGIDG LAGMEACFVF SVGGWWLWEA EAYGYAYLAW VLVAVVAGFL VWNWPSARIF MGDGGSGFLG FLIAAFTFAG HVWWDIPILL WIIVYGVFWF DATVTLLRRI LAGERWYSAH CSHAYQRLYQ IGWSHRKVLL AISGINMALV TVALWADANR EALPWIFLVT LMFLGIIYGG IERLRPMYPK E
|
| |