Gene Noc_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2228 
Symbol 
ID3705108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2573228 
End bp2574019 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content55% 
IMG OID637738704 
Producthypothetical protein 
Protein accessionYP_344218 
Protein GI77165693 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.414181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG ATCCCCTTAA CAGTCAGCAA CATTCCCCTC AACAGCCCCT TGACTGGGTT 
GCTCTCCTAG GTATCACGAT TGCTTCTTTA AGTGCATTAG CAGCAGTCTC GTCAGGATTT
GGACATCGTC TCGGGGCGTG GCACTTTACC ACCGGCTTTT TAATTCTGCG CTGGGCTTCT
TTCGGTGCAT TAGCCGCCAT TGTATTATCA TTGTGGGGCG CTTTCCGCAC TCGACCACAG
CGAAAACGGC GAGGCTTCTG GCATGCCCTG CTTGGTCTGG CACTCAGTTT AGCGCTGGTG
TCAATCCCGC TCTATTGGCT GCTTATGGCG CGTTCCGTGC CTCCCATCCA CGATATCACT
ACCGACACCG ATAATCCGCC TGCCTTTTCA GCGCTCCTGC CCGTGCGTGC CGAGGCTCCT
AACCCCTCCT ACTACGGTGG CCCCAGCATT GCTGTTCAGC AACAAAAAGC CTACCCGGAT
ATTAAACCTC TCCGTTTGCC CCTCAACCCT AAGACCACAT TGGATGAAGC ATTGACCATC
GCCCGCAGCC TAGGATGGAA GGTAATAGCC GTTGAATCTC GCGAAACGGC GAAGGGCGGC
ATCCGTCTCG AAGCTACGGA TACAACCCTC TGGTTTGGTT TTAGCGACGA TGTTGTCGTT
CGTATCACGC CCTTTGACGA CGGCTCTAGA GTTGATATCC GTTCCGTATC ACGGGTAGGC
CGCAGCGATG TCGGCACCAA TGCACGCCGG ATTCGCGCCT TTTTGGCGGC ACTAAAAGAA
CGCGCGGCAT GA
 
Protein sequence
MKKDPLNSQQ HSPQQPLDWV ALLGITIASL SALAAVSSGF GHRLGAWHFT TGFLILRWAS 
FGALAAIVLS LWGAFRTRPQ RKRRGFWHAL LGLALSLALV SIPLYWLLMA RSVPPIHDIT
TDTDNPPAFS ALLPVRAEAP NPSYYGGPSI AVQQQKAYPD IKPLRLPLNP KTTLDEALTI
ARSLGWKVIA VESRETAKGG IRLEATDTTL WFGFSDDVVV RITPFDDGSR VDIRSVSRVG
RSDVGTNARR IRAFLAALKE RAA