Gene Noc_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2147 
Symbol 
ID3705339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2479705 
End bp2480244 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content50% 
IMG OID637738623 
Producthypothetical protein 
Protein accessionYP_344137 
Protein GI77165612 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACA AAGTGATATC AAACATTAGA GTCCTCTCCT GTTTAATAAT TCTTGGATGG 
GGTTTGATAA TTAACCCTGA TCGTTTAGTT CTTGCAGAAG AGTTGCCACA ACAATCCGTG
CTGCCCCTTG AATTAGCCAA TAAGGCAGCA CTTGCCGCAG TTAAGCACTG CAAAAAAGAG
GGCTACCGGG TAAGCGCAAC GGTGGTGGAC GGAGCAGGGG TCATCAAAGC GCTGCTGAGG
GCGGATGGAG CTGGCGCCCA TACCGTCGAT AGTAGCCAGC GTAAGGCTTA CACTGCCGCG
AGCCTGCGGG AATCGACTCA AAAACTGGCG CTGCTTATTG CCCGAAAGCC CGAAATTCAA
GCACTAAGGG ATATGAACGA ATCTATTCTG ATTTTGGGCG GAGGGCTGCC TATTAAGATA
GAAGGTGAAG TCATCGGGGG TATTGGTGTG GGGGGAGCTC CTGGCGCTGC TTTGGATGAG
AATTGCGCCC GCGCTGGCTT AGAAATTTTA GGCGCGGATC TTTACCAAGA AAAAAATTAA
 
Protein sequence
MMNKVISNIR VLSCLIILGW GLIINPDRLV LAEELPQQSV LPLELANKAA LAAVKHCKKE 
GYRVSATVVD GAGVIKALLR ADGAGAHTVD SSQRKAYTAA SLRESTQKLA LLIARKPEIQ
ALRDMNESIL ILGGGLPIKI EGEVIGGIGV GGAPGAALDE NCARAGLEIL GADLYQEKN