Gene Noc_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2123 
Symbol 
ID3704927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2446049 
End bp2446933 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content51% 
IMG OID637738599 
Producthypothetical protein 
Protein accessionYP_344113 
Protein GI77165588 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.848786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT CTGTTGAACA GCTCATTAAA CAAACATCAG AACTCCTGGA ACGCCTTGAA 
AATTTGCTGC CGGCTCAGGC ACCAGAGCCC GAGTGGGAGC GCTCGGTTGC CTTCCGCTGG
CGCCGCATCC ACCCACGGGA TCCTGGCCAC TTAGAAGCGG TTCCCCATAC CCATAACATT
CAATTGAACG AACTCCGTGG TATTGAAACG CAAAAGCGGC AAATCGTTCA GAACACCACT
CAATTCCTCT CTGGCTTACC AGCTAACAAC ATCCTTCTCT GGGGCGCCCG CGGCACCGGC
AAATCCTCGC TGATTAAAGC ATTGCTCAAT GCCTTCTCCA GCCAAGGCCT GCGTCTTATC
GAGGTCGATC GGCACGAATT GCTAAACCTG CCTGATATTG TCGCGCTTAC TTCCCATCGC
CCGGAACGCT TTATTCTATT CTGCGATGAC CTCTCTTTTG ATGCTAACGA TCCTAGTTAT
AGAGCACTTA AGGTCGTACT CGATGGTTCC GTTAGCGCCA CACCAGAAAA TGTCCTAGTC
TATGCTACCT CTAACCGCCG CCACTTATTG CCCGAGTACA TGGAAGAAAA CCAACAAAGC
CAGTTAGTAA AAGGGGAAAT TCATCCCAGC GAAGCGACGG AGGAAAAAAT CGCGCTTTCT
GATCGATTTG GTCTCTGGTT ATCCTTCTAC CCTTTTGATC AGCAAAGCTA TATCGAGATC
GTCAGAGCCT GGCTCGATTA TTATGGCGTC ACTCCTGAAC TAAGGGAACA GGCCACCGAG
GCTGCCCTCC AATGGGCTTT GCTGAGAGGC TCCCGTAGTG GCCGTACCGC ATGGCAATTT
GCTCGTGATT TCGCCGGCCG TCACAAATTC AGCAATGCTC CTTAA
 
Protein sequence
MKTSVEQLIK QTSELLERLE NLLPAQAPEP EWERSVAFRW RRIHPRDPGH LEAVPHTHNI 
QLNELRGIET QKRQIVQNTT QFLSGLPANN ILLWGARGTG KSSLIKALLN AFSSQGLRLI
EVDRHELLNL PDIVALTSHR PERFILFCDD LSFDANDPSY RALKVVLDGS VSATPENVLV
YATSNRRHLL PEYMEENQQS QLVKGEIHPS EATEEKIALS DRFGLWLSFY PFDQQSYIEI
VRAWLDYYGV TPELREQATE AALQWALLRG SRSGRTAWQF ARDFAGRHKF SNAP