| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2118 |
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| Symbol | truB |
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| ID | 3704428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2439503 |
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| End bp | 2440429 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738593 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_344108 |
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| Protein GI | 77165583 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.206379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAC AACGCCGCTT TCAAGGCCAG GATATTCACG GAATGCTCCT ATTGGATAAA
CCCGTAGGCA TCAGCTCTAA TGGTGCTCTG CAGCGAGTTA AGCAGATTTA CCAAGCCCGA
AAAGCAGGAC ATACAGGCAG TCTAGACCCT CTTGCAAATG GATTGTTGCC AATTTGTTTG
GGGGAGGCAA CTAAACTGTC GGGGTTTTTG CTAGAAGCCG ATAAGCGTTA TCAGGTGATG
TGCCGTCTCG GCGTAGTGAC TACCACTGGG GACGCTGATG GCGAGGTGCT AGAAACCCAT
CCTGTCAACG AGTTAGATAG GGACGAGGTG GCGAAATTTT TGTCCGGCTT CTCTGGCCCG
CAAGAGCAAG TGCCTCCCAT GTATTCGGCG ATTAAACACC AGGGCCAGCG GCTCTATAAA
CTTGCCCGCC AAGGAATTGA AGTGGAGCGC AAATCTCGCC AGGTGACTAT CCATACCATT
AAATTGACGG AATTAGTTAA TAATGAGCTA GGGTTTGAGG TCTTTTGCTC TAAGGGAACT
TATATTCGTA CCTTGGCTGA AGACATCGGT CGGGCGCTAG GATGCGGCGC CCATGTTATA
GCGCTGCGCC GTACCCAAGT CGGTTCTTTT GGTGCTTCGG ATATGATCTC TCTGGAGGAG
CTGGAAATGC TAGCCGAGAC GAATGTTGAG GCACTCGGAA ATTTGCTGTT ACCCGTAGGG
CAAATTTTGG CGGATTGGCC TGCAGTAAAT CTAATCGCCG ATTTAGCCTA CTATCTGCGG
CAGGGGCAAT CGGTACGGGT TCCGCAAGCT CCAAGCGAAG GCTGGGTTCG TTTAATAGAG
TGTGGCAAGG GATTTTTTGG AGTAGGGCGG ATTACGGAGG ATGGACGTAT TGCTCCGCGC
CGTTTGATTT TCAGTCAGAG CGGTTAA
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| Protein sequence | MKKQRRFQGQ DIHGMLLLDK PVGISSNGAL QRVKQIYQAR KAGHTGSLDP LANGLLPICL
GEATKLSGFL LEADKRYQVM CRLGVVTTTG DADGEVLETH PVNELDRDEV AKFLSGFSGP
QEQVPPMYSA IKHQGQRLYK LARQGIEVER KSRQVTIHTI KLTELVNNEL GFEVFCSKGT
YIRTLAEDIG RALGCGAHVI ALRRTQVGSF GASDMISLEE LEMLAETNVE ALGNLLLPVG
QILADWPAVN LIADLAYYLR QGQSVRVPQA PSEGWVRLIE CGKGFFGVGR ITEDGRIAPR
RLIFSQSG
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