Gene Noc_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2107 
Symbol 
ID3704417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2423136 
End bp2423999 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content52% 
IMG OID637738582 
ProductNolW-like 
Protein accessionYP_344097 
Protein GI77165572 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1450] Type II secretory pathway, component PulD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACA TTATTCTCGG ATTAATGCTC GGGCTGAGTC TTTACTCCCC GCTTTCCTGG 
AGTCAGAGTG AAGAACTCGC CATCCTCCCC CTAAAGCACC GGCTACCCGA GCAGGTGATA
CCCGCCTTAC GCCCTTTTAT GGCCAAGGGT AGCGCCCTCC AAGCCGACAA TAACCTTATT
ATTGTCCGCA CCAACAAGGA AAATCTGGAG CAGATCAAAA CTATCCTGGC CCAGCTTGAC
AAGCCATTGC AGCAACTGTT AATTACGATC AAGCAGTTAA GTAGCCGCGA GGCGGTACAG
TTTCGCGCTG AAATAGCAAC AATTAAAGAA GGAAATACCC CGGCGCCAGA ACTTTCCCCT
TGGCACCGGG AGCAAGGAAA TTCGGGCTTC CTGGCTAATG GCCCTGATAG GAGTATTGCT
TATCTGGCGG GAACCCGGAC CCGGGATCAA GGCAGTAACA CCCAGCAGGT GCGAGTCATG
GAAGGACAAG CTGCCTCAAT ACGAACGGGC CACTCCATTC CCCTAGCCAA TAGGGCTTGG
CTGCTCCCAG GAGGACGGCT GCTTACTCAA AACTCAGTGT ATTACCGCGA TGTGGTGAGC
GGATTTGAGG TGCTTCCCCA CATCCATGGG GATGAAGTCA CCCTGGATAT TAGACCTTAT
CAAGCTAACC CAAGCAGACA GGGTGGGGGT CGTATCGCAA TACAAAAGTT AGCAACACAA
GTCTCGGTTC CATTAGGGCG GTGGCTGGAA TTAGGTGGTG CTGATGGAAA CCGTCAACAG
CAAGGGCTTG GAACCTTCTA CGGCACTCAT TCCCGCAACG AGGAATTGCG CCATATCTTT
ATTCGCGCAG ATAAAGTGAA ATAA
 
Protein sequence
MANIILGLML GLSLYSPLSW SQSEELAILP LKHRLPEQVI PALRPFMAKG SALQADNNLI 
IVRTNKENLE QIKTILAQLD KPLQQLLITI KQLSSREAVQ FRAEIATIKE GNTPAPELSP
WHREQGNSGF LANGPDRSIA YLAGTRTRDQ GSNTQQVRVM EGQAASIRTG HSIPLANRAW
LLPGGRLLTQ NSVYYRDVVS GFEVLPHIHG DEVTLDIRPY QANPSRQGGG RIAIQKLATQ
VSVPLGRWLE LGGADGNRQQ QGLGTFYGTH SRNEELRHIF IRADKVK