| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2094 |
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| Symbol | |
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| ID | 3704954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2405280 |
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| End bp | 2407400 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637738569 |
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| Product | Integrins alpha chain |
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| Protein accession | YP_344084 |
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| Protein GI | 77165559 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0736075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACC AAGATAACTC CATTTCTTTT TCCGTTTCGT GTCACCCTGA TTCTGCGGTG
GAATTCTCCG CCGTTATGCC TTGCGCTCCT GCGCCGCGGC CTTTGGCGGT GGCCCTTCGC
CGGGTGCTGG GCGGAGGCTT GCTGGCTGTA GGGCTGGCGG GTCCGGCCCT GAGCCAGAAT
CAGGACCCGG TCTTGAGCGC GGTTCCGGTC CCGAATCAGA GCAAGAGCCT GGAACTGTCC
ACTCTGGATG GCAGCAATGG CTTTGTATTC AATAGTCCGG CCACTTCCGT AAGCGGTGCT
GGGGATGTGA ATGGCGACGG GTTTGATGAT CTGGTGTTTG GCAACCCCTA TGCCTCTCCC
AATGGCCTTG ATAGTGCGGG CCAGAGCTAT GTAGTGTTTG GGACGGGTGG AGATTTTCCC
GCCGCGCTAA GTTCCTCCGA CCTTAATGGC GATAACGGCT TTACCCTCAA TGGTATTGCG
ACCTATAGCT ACTCGGGCCT CCCTGATAAA CTGGGCTCTT CGGTGAGCAG TGCGGGGGAT
ATGAACGGCG ATGGGTTTGA TGACATCCTT GTCGGCGCGT CCGGTGTCCA TACCTTCAAA
AATGGCGATA TAACGGGCCA GAGCTACGTG GTGTTTGGGA CCAGCGGGGG CTTTCCCCCG
GCGCTGGAGC GCTCAGATCT TGGTGGCAGC AATGGTTTTG TGATCCGCAA CATCTTGTCC
GGTGATTACT CGGGCTTTTC TGTGAGCGGT GCGGGGGATA TAGACGGCGA TGGATTTGAT
GATGTCCTTA TCGGCGCCAA AAATCTCGGG AGATCGGGAG ACTATAGTGT GGGCTATGCG
GATGAAACCT ACGTGATATT CGGAGACAGT GACGGAACCT CAGGTAATAA AATCCTTGCT
GATACCACTA ATGCCTACAG CGAAAGCTTT ACTACCTCGG TAAGTGGTGC GGGGGATGTG
AATGGGGACG GACTTAATGA CATGTTGCTC AGCACGTCTG GTTCTCCCTC CGGCGGTGGT
AGCGACAGCG ACGTTTCTGC GGTGAGCAAG ATCTACGTGG TCTTTGGGAT GAGCGGGCAA
TTTTCCGATT TTTTCAATCT CTCCAATCTC GATGGCGACA ATGGTTTTAT CATCACCAAT
AGTACCCAGA CCGATAATTC TTTACGTTAC ATGGTGAGCG GTGCGGGGGA TGTGAATGGC
GACGGGTTTG ATGATCTGGT GTTTGGCAAC CCTTATGCCT CTCCCAATGG CCTTGATGGT
GCGGGCCAGA GCTACGTGGT GTTTGGGACG GACGGGGGCT TTCCTGCGGC GCTGGATCTC
TCCACCCTGG ATGGCAGCAA TGGCTTCGTG CTCAACGGTA TCGAGGCCGG TGACCATTCG
GGCCGTTCGG TGAGCGGTGC GGGGGACGTC AATGGTGACG GGTTTGATGA TTTGGTGATT
GGCGCGCCTG GTGCCGGCTT GGAGAAGCTT GTACCAAAAA TGAATAAAGC AGACCTCATC
GGCGCGTTCA CCGCCAGCCC CAACGGTCTT GACAGTTCGG GCCAGGGCTA TGTGGTATTT
GGGATGGACG GGGGCTTTCC CGCGGCGTTG GAACTATCCG AACTTGATGG CAGCAACGGC
TTTATCATCA ACGGCATCGG GCCCGGTGGC CGTTTGGGTC AGTCGGTGAG CGGTGCGGGG
GATGTCAATG GCGATGGACT CGCTGACATT GTAATCGGCG CCGGGAGCAA GAGCTACGTG
GTGTTCGGGA CGGCTTCGGG GGGTCCCGCG GTTTTGCTCA AGGGGCTGAT TGCTGAGGTT
GGGGCATTGG ATCTACCGGC GGGGCTTGAA CACTGGCTAA CCAGGCCGCT TAAAAGGGCC
GAGAGGAAGC TGGCCCAGGG CGAGGTAGCC AAAGCACTTT ACAAGGTAGT GGGGTTTATC
CAGCGGGCGA GAGTGTTGCG GAAATATGGG ATACTGCCGG CGGCCGAGGC CAACGCCCTC
ATTGCCCAGG CCAAGGCTAT TATCAAGGCG CTATTGGATT TGCCGCAGCT CTCGGGCGTT
GCCGCCTCGG ATCTTCTCCC CGCTGACTTG GTACCCATTG ATGAGCCGGT ACCGAGAAGT
CCCTCCGCCC CTACTCGATA A
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| Protein sequence | MNNQDNSISF SVSCHPDSAV EFSAVMPCAP APRPLAVALR RVLGGGLLAV GLAGPALSQN
QDPVLSAVPV PNQSKSLELS TLDGSNGFVF NSPATSVSGA GDVNGDGFDD LVFGNPYASP
NGLDSAGQSY VVFGTGGDFP AALSSSDLNG DNGFTLNGIA TYSYSGLPDK LGSSVSSAGD
MNGDGFDDIL VGASGVHTFK NGDITGQSYV VFGTSGGFPP ALERSDLGGS NGFVIRNILS
GDYSGFSVSG AGDIDGDGFD DVLIGAKNLG RSGDYSVGYA DETYVIFGDS DGTSGNKILA
DTTNAYSESF TTSVSGAGDV NGDGLNDMLL STSGSPSGGG SDSDVSAVSK IYVVFGMSGQ
FSDFFNLSNL DGDNGFIITN STQTDNSLRY MVSGAGDVNG DGFDDLVFGN PYASPNGLDG
AGQSYVVFGT DGGFPAALDL STLDGSNGFV LNGIEAGDHS GRSVSGAGDV NGDGFDDLVI
GAPGAGLEKL VPKMNKADLI GAFTASPNGL DSSGQGYVVF GMDGGFPAAL ELSELDGSNG
FIINGIGPGG RLGQSVSGAG DVNGDGLADI VIGAGSKSYV VFGTASGGPA VLLKGLIAEV
GALDLPAGLE HWLTRPLKRA ERKLAQGEVA KALYKVVGFI QRARVLRKYG ILPAAEANAL
IAQAKAIIKA LLDLPQLSGV AASDLLPADL VPIDEPVPRS PSAPTR
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