| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2088 |
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| Symbol | |
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| ID | 3704948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2398025 |
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| End bp | 2399152 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637738563 |
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| Product | H+-transporting two-sector ATPase, C (AC39) subunit |
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| Protein accession | YP_344078 |
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| Protein GI | 77165553 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1527] Archaeal/vacuolar-type H+-ATPase subunit C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.295713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCGTC CTTTTTTAAC TATCACCAAG AGCCCTTCCA TAGCCACCGT TACCCGCTAT
GCTTATTTGA ATACCTTGGT CTCGGCTCTC TCCAAGCGTC TCCTGTCAGC AGAACAGCTC
CGGAATCTGG TGGACCAATC GGCCTCGGAT GTTTCGGTTT TACTTCGTAC CGCCGGGTTG
ACGGGGATTT CTCTGCAAGC AATGGAGGAT CGTTCTTTAG AGCAAGTGCT GGTGGATACC
TTATGGGCGG AAGCCCAACG GCTGATTCGT CCTCTGAGCG CTGAAGCCCA GGAACTCGCA
AGCTATTGGC TACGCCGTTT TGAGATAGGT AACCTGAAAA TTGTGCTCCG GGGTAAGTTG
ACTGGACGTC CAAAGGAGGC CATCCAAGCC GATCTTATTA AGATTAATGG AATAGCGGCC
TTGCCCTTGA ACTCGTTGAT GGAGGCCGAG GATGCTCAGG AGGTGCTCCA TTGTTTAGAG
GGAACACCCT ATGCTGGTGT TGCCCGCCAG GCCCGTTCGG TCTATGGAGG AGAGCATTAT
GATGTGCCTC ATGTCGGAGG AGAGGGTCGA GAATTGTTTC TTATCGAAGC CACAATAGAT
AGGGAATACT ATAGTGGATT GGCGCGGCGA GTAAATGCTA TCCAGGAAGA ACGGGACCGC
CATTATTTGC GAATATTGAT CGGTTATCTC ATCGACCAAA CCAACTTGGT CTGGTTATTG
CGCTACCGGT TTGCTTACCG TCTTGGGCCA CCGCTGACCT ATTTTCTTTT ATGCCCCGGT
GGGTATCATT TGCGTAGTCA GCACTTGCTG GCCCTCGCGC GTGGGGAAAA CTTCGAGGAG
ACTTTACACA ATCTACCTGC TCCTTTAGCC CCTTTGGTAG CAGGGGCAGT TTCCACTTCC
GAGGTGGAGG AGATGCTAGG AAAACACTTA CTCGAAGTCG CGCAGTTTAT CCTGAAACGC
ACCACTTTTA ATTTGGGACG GGCCTTCGCT TATCTATTTC TTCGTGAAAA AGAATTATTA
CGCATCCATG GGATCATCAA GGGCCGCACT TTGCAGCTCG CCCCCCATCT TATTCACCAG
GCCATGGGAC TGGAAAGTGC CGGTTTCAAG GAGGATGAGT CTTTTTAG
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| Protein sequence | MHRPFLTITK SPSIATVTRY AYLNTLVSAL SKRLLSAEQL RNLVDQSASD VSVLLRTAGL
TGISLQAMED RSLEQVLVDT LWAEAQRLIR PLSAEAQELA SYWLRRFEIG NLKIVLRGKL
TGRPKEAIQA DLIKINGIAA LPLNSLMEAE DAQEVLHCLE GTPYAGVARQ ARSVYGGEHY
DVPHVGGEGR ELFLIEATID REYYSGLARR VNAIQEERDR HYLRILIGYL IDQTNLVWLL
RYRFAYRLGP PLTYFLLCPG GYHLRSQHLL ALARGENFEE TLHNLPAPLA PLVAGAVSTS
EVEEMLGKHL LEVAQFILKR TTFNLGRAFA YLFLREKELL RIHGIIKGRT LQLAPHLIHQ
AMGLESAGFK EDESF
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