| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1992 |
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| Symbol | |
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| ID | 3704876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2290828 |
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| End bp | 2291952 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637738468 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_343984 |
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| Protein GI | 77165459 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.121396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGAT CAGCCCCGGT CGCGAACGTT AGCCGCCAAC TCCAACAAAT AGGTATTAGC
GTATCATCCT TCATCACAAC TGCAAGGGCA AAACTGTCGG GGATACCTAT TAACCACTTA
CTACTCCTAT TCACCTTATT ACTCAGCAGT ATGCCAGAAT TACAGGCGGC GGCCAGGGAA
CTGGTTACGG TAAAACCTCT AGCGCAGCTG GCGGAATTCC CCCCAATCAC TGCCTCCGCA
GAGGTGATTA CCCTTAACAA TAGTCAGCTC AACGCTGAGG TCACCGCTGT TATTCTTGGC
TTGCCCGTTG AAATAGGACA AGTAGTCGCG CCCGGAACCC CGCTAGTGCT GCTTGAGAAA
ACAGATCTAG AACTCGCCCT TGAGCGGGCC AAGGCAACCC TAAACTCGCT TGAAGCCAGC
CATGCGTTGG CGCAGCGTCA ATTAACCCGC ACCCAATCCC TGGCTAAAAA AAGGCTTATC
ACGGAAGAAA TACTCAATCA GCGCGAAACC GAGCTAAAGG TTAGCAAAGC GGAGCTGGCA
GTCCAGCGGA TCACGGTAAA ACAACAGCAA AGAGCGCTTG AAAAGACGGT AATTCGCGCT
CCATTTAAGG CCATCGTCGT GGAACGGCTG GGGCAGGTGG GTGAACTGGC TATGCCGGGC
ACGCCGCTTA TCCATATCCT GGATGCAGAA CAAATCTTGG TTTCCGCTAA ACTTCAGCCC
CGGGATATCT TTTCCCTGCG CAATGCAGCC ACGGTGGTAT TCATCGCTGA AAATCACCCC
TATTCCCTGA AGCTTCACCG CGTGGTTCCC GCGCTTGATC TCCGTGAACG AAGCCAGGAA
GTGCGCCTGC GATTTACCGC TGCGCCCGCC TTGATTGGCA CCACCGGGGA TTTAGTTTGG
CGCCCTAAAA CTCCCCATTT ACCTGCCGAT TTGTTGGTTC GGCGCGGCAA CAAACTAGGC
GTGTTTGTAT TAGCGCGGGA ACGGGCCAAA TTCGTAGCTC TAGCCGATGC CCATGAAGGC
CAGCCCACCA AGATCAATCT ACCGGGAGAT ACTCTCATTA TCATTGATGG TCGCTTTACC
CTCCAGGATG GGGAAGCAGT TCAGGTCACC AACCTTGCTG ATTAG
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| Protein sequence | MGRSAPVANV SRQLQQIGIS VSSFITTARA KLSGIPINHL LLLFTLLLSS MPELQAAARE
LVTVKPLAQL AEFPPITASA EVITLNNSQL NAEVTAVILG LPVEIGQVVA PGTPLVLLEK
TDLELALERA KATLNSLEAS HALAQRQLTR TQSLAKKRLI TEEILNQRET ELKVSKAELA
VQRITVKQQQ RALEKTVIRA PFKAIVVERL GQVGELAMPG TPLIHILDAE QILVSAKLQP
RDIFSLRNAA TVVFIAENHP YSLKLHRVVP ALDLRERSQE VRLRFTAAPA LIGTTGDLVW
RPKTPHLPAD LLVRRGNKLG VFVLARERAK FVALADAHEG QPTKINLPGD TLIIIDGRFT
LQDGEAVQVT NLAD
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