| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1982 |
|---|
| Symbol | |
|---|
| ID | 3705441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2277063 |
|---|
| End bp | 2278568 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637738458 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_343974 |
|---|
| Protein GI | 77165449 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4371] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR03016] uncharacterized protein, PEP-CTERM system associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGCAA GGAGGCACTT TAACCTTATT GGGGGAGGCG TATTTTTACT TTTTGGAGCC
TGTGCTAATG GGGCAGAATG GAGGTTTACG CCTCTACTAG CCGGGGGGGA GATTTATACG
GATAATGTCA CTTTAGCTCC CAGGGGAGAG GAAGAAAGTG ACTTTATTAC CCAAATTACT
CCAGGTTTCT CTCTGCGGGG TAGGGGTAGC CGGCTCCAGC TAGGAGCCAA CTACCTCATG
CAGAATCTGT TTTTTGCCAA GGACGGCGAT CGAAATACGA CCTTTCACCG GTTTCTCGGA
TTGGCTAGGG CAGAATTAGC TAAAGATCAC CTATTTTTTG ATTTGCGAGC TACTGTTTTT
CAAGCTCTGA TTTCTCCTAC AGGTGCCGCA CCACCATTTC GCGGTTTTGG CGGTGGCATG
GGCGGTGGCA TGGGCGGTGG CATGGGCGGT GGCATGGGCG GTGGCATGGG CGGTGGCATG
GGCGGTGGCA TGGGCGGTGG CATGGGCGGT GGTAGAAGCG GAGTTTGTAG CAGCGGCGGT
GGTGGTTTCG GCGGCGGTGG TTTCGGCGGT GGTGGTTTCG GCGGTGGTGG TTTCGGCGGT
GGTGGTTTCG GCGGTGGTGG TTTCGGCGGT GGTGGTTTCG GCGGTGGTGG TTTCGGCGGT
GGTGGTTTCG GCGGTGGTGG TTTCGGCGGT GGTGGTTTCG GCGGTGGTGG TTTCGGCGGT
GGTGGTTTCG GCGGAGCAGG AAATTCCTTT GCAACCGGTA ATATTAGCAC TGTTGCAACT
TTACAGGCAT CGCCTTTCTA CTGTTGGCGA TGGGGAAATA CCGCTTCGGG CCAGGTACGC
TATCAACGCC AAGAAGTTTT AGTTGCTCCT GAAGGGAGGC CGACAAGAAA TGCGGATAGA
ATATTCGGGG TTCTACGGAG TGGCTCCCGG TTTGACCGTT TTCGCTGGGC GTTTCTTACG
AACCAGCGTT ACTCTCATCG TGAGGATTCC CCAACAGTTC GACTTGCCAA CTATCTTTTT
AGACTCCAAA TGCCTCTTTT CCGTCGGGTA TCGGCTTTTG GGATATTGGG TTATGAAGAT
AATGCATTTA GCCGAGGGCT TGGAGATGGA AGCACCAGTG GAATCCGATG GAACGTGGGT
CTTTCTTATA ATCCCTCCCG TAGGACACGG ATAATAGGGG CGGTTGGCCA GCGTTTTTTT
GGTACTACTG CCTTTGTAAG GGCAACCTAC GGAACCAAAC GTAACATTTT TAATGCTTCT
TATAGTCAGC GATTTTTTAC CTTCGATCAA TTGTTATTTC AACAACCGGA TTTTACCGAT
GGCCCGATAA ATACTTTACC GACGGTTACG ACGGAGACTT TCCTGAGCAC GCGTACCATG
TTGTCCTGGA CTCACCTGAT GACCGAGAAA ACCCGATTGT TAGTGCGCGG TTTTCAAGTA
AATCGGGAGT TCCAGGAGAG CGGTGAAGAA GAGGATCTGA AGGGGGGGAA CCTATTTTGG
ATCTAG
|
|---|
| Protein sequence | MCARRHFNLI GGGVFLLFGA CANGAEWRFT PLLAGGEIYT DNVTLAPRGE EESDFITQIT
PGFSLRGRGS RLQLGANYLM QNLFFAKDGD RNTTFHRFLG LARAELAKDH LFFDLRATVF
QALISPTGAA PPFRGFGGGM GGGMGGGMGG GMGGGMGGGM GGGMGGGMGG GRSGVCSSGG
GGFGGGGFGG GGFGGGGFGG GGFGGGGFGG GGFGGGGFGG GGFGGGGFGG GGFGGGGFGG
GGFGGAGNSF ATGNISTVAT LQASPFYCWR WGNTASGQVR YQRQEVLVAP EGRPTRNADR
IFGVLRSGSR FDRFRWAFLT NQRYSHREDS PTVRLANYLF RLQMPLFRRV SAFGILGYED
NAFSRGLGDG STSGIRWNVG LSYNPSRRTR IIGAVGQRFF GTTAFVRATY GTKRNIFNAS
YSQRFFTFDQ LLFQQPDFTD GPINTLPTVT TETFLSTRTM LSWTHLMTEK TRLLVRGFQV
NREFQESGEE EDLKGGNLFW I
|
|---|
| |