Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1980 |
Symbol | |
ID | 3705439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2274635 |
End bp | 2275693 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637738456 |
Product | hypothetical protein |
Protein accession | YP_343972 |
Protein GI | 77165447 |
COG category | [V] Defense mechanisms |
COG ID | [COG2348] Uncharacterized protein involved in methicillin resistance |
TIGRFAM ID | [TIGR03019] FemAB-related protein, PEP-CTERM system-associated |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG AAGCATTGTG CCTTAGTGAT GCGCGTCCTC TGACGGTCTG CGTTTTAACC AAAAAAGAAG AAAATCGCTG GGATGAGTTT GTGGAAGCCC ATCCTGAAGC AACCTTTTTC CATCTGGCGG GCTGGCGGGA GGTGCTGGAA CGAGCTTATG GACATGCAAC CCATTATTTC TATGCTGAGC AGGATGGCAA AATTGTGGGC CTGCTCCCCT TGGCGCGTAT TCGCAGTCGA CTATTTGGTG ATGCACTTAT CTCAACGCCT TTTTGTGTCT ATGGTGGCGC GGTGGGATCA CGGGAGGCAT GCGATGCACT GGAAGCCGCC GCCTATCGGG TAGCCTGGGA TCTAGGGGTG GATTATCTTG AACTACGTAA CCTTCAACTT CGTCACTCCG ATTGGCCCTG CTCTGAACTT TACGTGACAT TTCGCAAGAA TATTGATCCT GATCCAGAAA AGAATCTTGC AGCTATTCCT CGCAAGCAAC GAGCGATGGT ACGTAAAGGG ATCAAAGCGG GATTAACCAG CAGCACAGAC TCGGATATAG AACGTTTCTT TCTGATCTAT TCTGAGAGCG TCCGTAATTT AGGGACTCCA GTTTTCCCAA AGCGCTATTT TGAAATCCTT AAGACCGTAT TTGGAGATCG CTGCGAAGTG CTGACCATCT TTCATGAAGG GACTCCAATA AGCAGTGTCA TGAGCTTTTA TTTCCGCGAT GAAGTACTTC CCTACTATGG AGGAGGGCTT GCAGGGGCTC GGGAATTTAA GGCCAATGAT TTTATGTATT GGGAATTAAT GCGCCGGGCC TCGGAGCAGA GTGTGCGTGT TTTTGATTAT GGGCGAAGCA AGTTGGATGC AGGTTCCTAT CGTTTTAAGA CCCACTGGGG GTTTAAACCT CAGCCCTTGC ATTACGAGTA TAAATTAATT AAGGCAAATA AAGTTCCTGA GAAGAATCCT CTCAACCCCC GTTATCGTCT CTTTGTGGAA GGATGGAAAC GGTTGCCCAT GCCTCTCACC CGGTTAGTGG GACCCTGGAT TGCCCGGGAT CTTGGGTAA
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Protein sequence | MKNEALCLSD ARPLTVCVLT KKEENRWDEF VEAHPEATFF HLAGWREVLE RAYGHATHYF YAEQDGKIVG LLPLARIRSR LFGDALISTP FCVYGGAVGS REACDALEAA AYRVAWDLGV DYLELRNLQL RHSDWPCSEL YVTFRKNIDP DPEKNLAAIP RKQRAMVRKG IKAGLTSSTD SDIERFFLIY SESVRNLGTP VFPKRYFEIL KTVFGDRCEV LTIFHEGTPI SSVMSFYFRD EVLPYYGGGL AGAREFKAND FMYWELMRRA SEQSVRVFDY GRSKLDAGSY RFKTHWGFKP QPLHYEYKLI KANKVPEKNP LNPRYRLFVE GWKRLPMPLT RLVGPWIARD LG
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