| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1959 |
|---|
| Symbol | |
|---|
| ID | 3704973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2245504 |
|---|
| End bp | 2246460 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637738435 |
|---|
| Product | esterase/lipase/thioesterase family protein |
|---|
| Protein accession | YP_343951 |
|---|
| Protein GI | 77165426 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | [TIGR03100] hydrolase, ortholog 1, exosortase system type 1 associated |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.175259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACT ATGTTGGGAA TGGGTATAGG GTAGAGGGGT TTCCAGGCGC ACTCAAAGCC
AGGGGAGACA TAACGCATAT TTATAACGGA CAGTCGGTGT CCAGGGTGAC GGCTGAAGAA
GCACTGACCT TCCATTGCCT TGGAGAGCTT CTCGTTGGCA TCTTGCACCG AGGTTCAGAG
TACGCCACCC GGGGTGTCTT GGTCGTTGTT GGTGGCCCCC AATACCGGGT AGGCAGTCAT
CGCCAGTTTG TATTGTTTGC CCGCTGGTTG GCGGAAGCGG GAGTTCCTGT ATTCCGTTTC
GATTACCGTG GAATGGGAGA CAGCGGTGGC GGTACTCGTA CCTTTGAGAA TATTGAAGTT
GATATCCGTG CAGCGATCGA TGCTTTTCTA GAAGCTGCGC CAGGGTTAAG AGAAATCGTG
ATTTGGGGCC TTTGCGATGC CGCCTCGGCG GCCTGTTTTT ATGCGCCCTC AGATCCGCGA
GTAGCAGGTT TGGTGTTGTT GAACCCCTGG GTGCGAACGG AGGAAGGGCA GGCAGCCGTT
TACCTCAAGC ATTATTATTT TAGAAGGTTA GTTAGCGGCG ACTTTTGGCG CAAGTTTTGG
CGCCGGGAAT TTGATTATAA GGATTCACTG CGTTCATTGG GAGATATATT AAGGAAAGCT
AATTCCTGGC GGCAGAAGGT TGATGAAGTT GAGACTGAAG AAATATTGCC GTTGCCCAAG
CGGGTATATA AAGCTTTAGA GCAATTCCAG GGCAGGACGC TCTTGATACT AAGCGGCAAG
GATCTGACAG CGAATGAGTT TCGCGATACC ATCTCGTCTT CATCCGCTTG GCGCGGCTTG
CTTCGCAGTA GAAGCATTGA GCGTCGCGAG TTGTCGACTG CGGACCATAC CTTCTCCCGC
CGCGTTTGGC GGGATCAGGT GGCTCAGTGG ACCCTTGAAT GGGTGCGGTC ATGGTAA
|
|---|
| Protein sequence | MMNYVGNGYR VEGFPGALKA RGDITHIYNG QSVSRVTAEE ALTFHCLGEL LVGILHRGSE
YATRGVLVVV GGPQYRVGSH RQFVLFARWL AEAGVPVFRF DYRGMGDSGG GTRTFENIEV
DIRAAIDAFL EAAPGLREIV IWGLCDAASA ACFYAPSDPR VAGLVLLNPW VRTEEGQAAV
YLKHYYFRRL VSGDFWRKFW RREFDYKDSL RSLGDILRKA NSWRQKVDEV ETEEILPLPK
RVYKALEQFQ GRTLLILSGK DLTANEFRDT ISSSSAWRGL LRSRSIERRE LSTADHTFSR
RVWRDQVAQW TLEWVRSW
|
|---|
| |