Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1958 |
Symbol | |
ID | 3704972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 2244251 |
End bp | 2245510 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637738434 |
Product | hypothetical protein |
Protein accession | YP_343950 |
Protein GI | 77165425 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.441917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAAAGC GAGTATTGAT GATCGCTTAT CATTTTCCGC CCGCCAGCGG CAGCAGCGGT ATGCAGCGCA CTCTCTCTTT CTCCCGCGAT CTTCCCGAAC ATGATTGGCA GCCCATCATT CTGAGCATCT ACCCTCGTGC CTATGAACGG CGCTGTGACG ACCAATTGGC TGACATTGGC TCTGAAACTA TCGTGTATCG TGCTTTTGGG CTTGATACTG CGCGCCATTT GGCATTGGGA GGTCGCTATA GTCGATTCCT GGCGCTTCCG GATCGCTGGG TAAGTTGGTG GCTCGGAGCT GTGCCCGCGG GACTGAGGCT TATTCGTCGT TATCGTCCCC AGGTTCTTTG GTCTACTTAT CCGATTGCTA CGGCCCATCT CATTGGTTTA ACTTTACATC GGCTGAGCGG GATTCCTTGG ATTGCCGATT TCCGAGATTC CATGACGGAG GATAATTATC CGTCTAATCC ACGGGTACGA CGCGCTTATC GTGCGGTTGA AGCGGCTACA GTGCACCGCT GCACGCGAGC GATATTCACC GCGCCTGGGG CGGTGCGTAT GTACGCCGAG CGTTACCCAG AGCGTTCCGA TAAAACATGG GTTCTTATTG AGAATGGTTA CGAAGATTCT ATTTTTGATA CGGTTTCTTT GCCTTCATTG AGGGATTCTC CGAGGCCGTT TCGGCTTGTA CACAGTGGGG TAGTGTATCC TAACGAACGG GATCCCCGTG CATTTTTCGA GGCACTGGCA AGCCTGAAGC GATCAGGCCA GATCACCGCT CAAAGCCTAC AGGTGGTGTT CCGGGCCAGT GGTTCGGAGG ATTACTTCAG GCAGCTTTTG CGCGAATGGG GCATTGATGA CATTGTGCAC TTTGAACCCC ATATCCCTTA TCGTGGGGCA CTTGCTGAGA TGCTTACAGC TGATGGACTT TTGATTTTAC AGGCAAGCAA TTGCAACCAT CAAATTCCAG CAAAGCTTTA TGAATACCTG CGCGCACGGC GGCCGATTTT GGGGCTTACG GATTCTGAGG GAGACACTGC GAGGGTGTTG CGGCAGGCGG GTATTGAAAC CGTTGCCCCC CTTGATTCGG CTGCGGCTAT CACGGCAACA CTGCAAGATT TCCTTAAGCA ACTTCAGGAT GGCACAGCCC CCGTGGCAAG CGAAGCAGAG ATCGCTCGTA GCTCAAGGCG TAGCCGTGTA GCATCCCTAG CTGAATGCTT GGAGGAGACG ATTGCCACGG ATCTCAACTT TGAGAGGTAA
|
Protein sequence | MVKRVLMIAY HFPPASGSSG MQRTLSFSRD LPEHDWQPII LSIYPRAYER RCDDQLADIG SETIVYRAFG LDTARHLALG GRYSRFLALP DRWVSWWLGA VPAGLRLIRR YRPQVLWSTY PIATAHLIGL TLHRLSGIPW IADFRDSMTE DNYPSNPRVR RAYRAVEAAT VHRCTRAIFT APGAVRMYAE RYPERSDKTW VLIENGYEDS IFDTVSLPSL RDSPRPFRLV HSGVVYPNER DPRAFFEALA SLKRSGQITA QSLQVVFRAS GSEDYFRQLL REWGIDDIVH FEPHIPYRGA LAEMLTADGL LILQASNCNH QIPAKLYEYL RARRPILGLT DSEGDTARVL RQAGIETVAP LDSAAAITAT LQDFLKQLQD GTAPVASEAE IARSSRRSRV ASLAECLEET IATDLNFER
|
| |