Gene Noc_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1937 
Symbol 
ID3705474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2214795 
End bp2216084 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content49% 
IMG OID637738413 
ProductVanZ like protein 
Protein accessionYP_343929 
Protein GI77165404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAATC TCCACGCTAA CGGGAGATTA TGCATGATGT ATTCCAAAGG GCAGGCTAAA 
CCATTTCGCT TATTGTCGGT AATCATCTAC GCGGGATTGC TGGCTTATGG TACCCTCTAT
CCGTTGCATG ATTGGCGAGT CCCATTGGAA TCGGGGTGGT TGCCTATTTT TGGGCACGGA
TCGAAAGTTA GCTATTCAGA TATTTTTACC AATATTGTCG TCTATATCCC GTTAGGTTTC
TTGCTTGCTC GCGCCGTTAT TTCCCGTTCC CCTATTGGCA AAATTATTGC TGCTCTTTTG
GGAGGAACGG TATTAAGTTT TTTGCTTGAG TCCTTACAGG TTTACCTACC CAGCCGAGTA
TCTTCATTCC TAGACTTAGC GCTTAACACT ACGGGAGCCC TTGCGGGCGG CTTGCTCTTC
GTTGCGGTAC GTCCCCAAGG CCGGATTTAT GAGTGTCTAC TTTCATTGCG TCAAGCCCAC
ATACGGCCTG GAGCGTTAGC CAGCGCAAGC ATGTTTTTGT TAGGGTTGTG GGGGCTTTCT
CAAACCAGTC CATGGGTTCC GTCGCTTGAT ATCTCTGGCC TGCGTCAGGA ATTAAAGCCG
TTATGGTATA CGTTGACACA GCAAATCCCC CTCGATTTTA ACCAGATGGT AGTATATATT
TTGACCATCA TGGCGCTGGG CACGGTGGGT GCCGCAGCCT TAAAATCCGA TAAATCCGCG
TTTTGGTGGT TTGCGGTATT CATTAGCGCG GTGCTATTGT TTAAAATACC CGTGGTGGGT
CGCCCGCTCT CTGCTGAGGC CCTTGCAGGT GCGGGAGTAG GGGTAGTGGG ATTTGCCTTG
CTGCGGCAGT TACCAGCAAG GGGTGCTATT GTAAGCAGTA TCGTTGCCAT TCTTGGGGCG
GTTATTATTG ACGAACTACG CGTTGGGACA ACGTGGCTAA TCTCTAATTT TAACTGGATA
CCTTTCAAGG GGCACTTGAC TAGCACCGTG ATTGGCATTG TTGATACGCT CATTGGTGCT
TGGCCTTTTT TTGCCCTTAG TATACTGGTA CTTCATCTTC GCCCCCAACG GCCCAGAAGG
ATACTGGTCT GGGGAGGAAT CGGGGTGTTT GTTGGGATGT TCACCTTGGA ATGGAATCAG
CAATACATTG CAGGCCGATA CCCTGATATT ACTGATGCTG TATTGGCTTT ACTTGCTTGG
TGGTTACCTT GGTTCTACAC GCCATTACGC CAGGAAATAC GTAGGCACCA TTACCCGGAT
TTAAAAGGTA ATCTTAGAGA AAGCGGATGA
 
Protein sequence
MHNLHANGRL CMMYSKGQAK PFRLLSVIIY AGLLAYGTLY PLHDWRVPLE SGWLPIFGHG 
SKVSYSDIFT NIVVYIPLGF LLARAVISRS PIGKIIAALL GGTVLSFLLE SLQVYLPSRV
SSFLDLALNT TGALAGGLLF VAVRPQGRIY ECLLSLRQAH IRPGALASAS MFLLGLWGLS
QTSPWVPSLD ISGLRQELKP LWYTLTQQIP LDFNQMVVYI LTIMALGTVG AAALKSDKSA
FWWFAVFISA VLLFKIPVVG RPLSAEALAG AGVGVVGFAL LRQLPARGAI VSSIVAILGA
VIIDELRVGT TWLISNFNWI PFKGHLTSTV IGIVDTLIGA WPFFALSILV LHLRPQRPRR
ILVWGGIGVF VGMFTLEWNQ QYIAGRYPDI TDAVLALLAW WLPWFYTPLR QEIRRHHYPD
LKGNLRESG