Gene Noc_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1922 
Symbol 
ID3705554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2197706 
End bp2198083 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content40% 
IMG OID637738398 
Producthypothetical protein 
Protein accessionYP_343914 
Protein GI77165389 
COG category[S] Function unknown 
COG ID[COG3011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAACG GTGACAATAA AACCATAAAA GTATACTACA ACAGCGCCTG TCCCATATGT 
AACGCGGGAA TAAAACACCA AAAATCTAGA GTTCCCGGCC ACCAGATAGA CTGGAATGAC
GTTCATACCC AATCAGGTGT GCATAATGAA GTATCGCCTA ACCTTGAGTT AGTCCGCAAA
AAACTTCATG TAATGGATAG GAAGGGAAAT ATAAAAGTAG GTATTGAAGC ATTTGAGGTT
ATTTGGAGAA ACTCACCCAA TGAGCACTGG AAAGCGAAGA TCGTCTCCTT TCCTGTGATA
AAGCAGATTT CTATTTTTTT TTATAATGTG TTTGCAGAAG CTTTATATCG ATGGAATCGC
TGGAAGCGGC ATTGGTAA
 
Protein sequence
MVNGDNKTIK VYYNSACPIC NAGIKHQKSR VPGHQIDWND VHTQSGVHNE VSPNLELVRK 
KLHVMDRKGN IKVGIEAFEV IWRNSPNEHW KAKIVSFPVI KQISIFFYNV FAEALYRWNR
WKRHW